Gene Nwi_2681 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2681 
Symbol 
ID3675540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2912042 
End bp2913922 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content64% 
IMG OID637714247 
Productcyclic beta-1,2-glucan ABC transporter 
Protein accessionYP_319286 
Protein GI75676865 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID[TIGR01192] glucan exporter ATP-binding protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.738277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGCT CGAAAACGCT ACAGCATCGC GATTCACAAG AGCCTTGCCT GATGTCGATG 
GTCCGCCTTT ACACGCGCGT TCTCGAACTG CTCGGCGCGG AAGCGCGGCT CGGCTGGATC
CTGGCCGGCG CCAACCTGCT GCTGGCGGGC GCGCAGTTCG CCGAGCCGGT GCTGTTCGGC
CGCATCATTG ACGTCCTGTC CGGCAATCCA GCCTCCGGCC TCTTTGGAAT GGCCTCGACG
TCACCCTGGC CGCTGCTGGC GGTTTGGGCG GCCTTCGGCC TGTTCACGAT CCTGTGCGGC
GTGACCGTGG CCCTGCAGGC CGACCGTCTC TCGCATCGCC AGCGTCAGGC CGTGCTGACC
GGCTATTTCG AGCACATCAT GCAGTTGCCG CTCGCCTACC ACGCCGGCAC CCATTCGGGA
CGGCTGATGA AGGTGATGCT GCAAGGCACG GATGCGCTGT GGCGGCTGTG GCTCGGATTT
TTCCGCGAGC ATTTCGCGGC GATGATGTCG CTCGTCGTGC TGCTGCCGCT GTCGCTCTAT
ATCAACTGGC GGCTGGCGAT CCTTCTGTTC GCGCTCTGCA TCGTATTCAC GATGCTGACG
ACGCTGGTGG TTCGCAGAAC CTTCGACATG CAGAACGAGG TGGAGGCGCA TTTCAGCGAT
CTTTCCGCGC GGGCCTCCGA CGCCCTCGGC AACGTCGCGC TGGTGCAGAG CTTTGTTCGG
GTCGACGCCG AGGTGCAGGG CCTGCGGTTC GTCGTCGACA AGCTGCTGTC TGCGCAGATG
CCGGTGCTGT CGTGGTGGGC CGTCGTCACC GTGATGACGC GCGCCTCCAC CACCATCACC
ATTCTGGCAA TCTTCACCGC AGGCATCGCG CTGAACCAGC GGGGAATGAC GTCGATCGGC
GAGATCGTGA TGTTCGTGAG CTTCGCCACC ATGCTGATCC AGAGGCTGGA GCAGGTCGTT
TCCTTCATCA ACAGCGTGTT CATGGAGGCG CCGCGTCTTA AGGAGTTCTT CGACGTGCTC
GACGCCGTTC CGGCCGTGCG CGACCGGCCC GACGCCGTCG ATCCCGGACG ATTGCAGGGA
CGCGTTGAAT TCAACGACGT GTCGTTCTCC TACGACAGCA AAAGGCCGGC GGTCGCGAAC
CTGTCGTTTG TCGCATCGCC TGGGGAAACC ATCGCGCTGG TCGGCCCGAC CGGCGCGGGC
AAGTCCACCG CCGTCGCGCT GCTGCACCGG GCGTTCGATC CGCAATCCGG CATCATCAGG
ATCGACGGCA TGGACATTCG CGACCTCACG CTCAGCGGGT TACGGCGAAA CATCGGCGTG
GTGTTCCAGG AGCCGTTGCT GTTCAACCGC TCGATCGCCG AGAACCTCCG CGTCGGCAAG
CCCGACGCCA CCGACGAGGA GATGCGGCTC GCCGCCGGAC GTGCCCAGGC GCTGGACTTC
ATCGAACGCG GCGAGAAAAA ATTCGATACG CATGCCGGCG AGCGCGGGCG AATGCTGTCC
GGCGGCGAAC GGCAGCGGCT GTCGATCGCC CGCGCCCTGC TGAAGGATCC GCCGATCCTG
ATCCTCGACG AGGCGACCAG CGCGCTGGAC GCCGTGACCG AGGCCAAGGT CAACGCCGCG
CTCGACGAGG TGATGAAGGG ACGCACCACA TTCGTCATCG CGCATCGGCT GTCCACCATA
CGGAACGCCG CGCGAATTCT GGTTTTCGCG GATGGCCGCG TGATCGAAAG CGGAACTTTC
GGCGAACTCC TGGCGAACGG AGGTCATTTC GCCCAACTCG CGAAAGCGCA ATTCATGACG
CAGGAGAGTA CCCAGGCAGA CCTGTCCTCA TCGCGAACCA ACCCGGCCGT CGAAATTCGG
CCCCTTTCGT TGGGGAATTA G
 
Protein sequence
MLRSKTLQHR DSQEPCLMSM VRLYTRVLEL LGAEARLGWI LAGANLLLAG AQFAEPVLFG 
RIIDVLSGNP ASGLFGMAST SPWPLLAVWA AFGLFTILCG VTVALQADRL SHRQRQAVLT
GYFEHIMQLP LAYHAGTHSG RLMKVMLQGT DALWRLWLGF FREHFAAMMS LVVLLPLSLY
INWRLAILLF ALCIVFTMLT TLVVRRTFDM QNEVEAHFSD LSARASDALG NVALVQSFVR
VDAEVQGLRF VVDKLLSAQM PVLSWWAVVT VMTRASTTIT ILAIFTAGIA LNQRGMTSIG
EIVMFVSFAT MLIQRLEQVV SFINSVFMEA PRLKEFFDVL DAVPAVRDRP DAVDPGRLQG
RVEFNDVSFS YDSKRPAVAN LSFVASPGET IALVGPTGAG KSTAVALLHR AFDPQSGIIR
IDGMDIRDLT LSGLRRNIGV VFQEPLLFNR SIAENLRVGK PDATDEEMRL AAGRAQALDF
IERGEKKFDT HAGERGRMLS GGERQRLSIA RALLKDPPIL ILDEATSALD AVTEAKVNAA
LDEVMKGRTT FVIAHRLSTI RNAARILVFA DGRVIESGTF GELLANGGHF AQLAKAQFMT
QESTQADLSS SRTNPAVEIR PLSLGN