Gene Nwi_2656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2656 
Symbol 
ID3675109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2888350 
End bp2889957 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content65% 
IMG OID637714222 
Productputative monovalent cation/H+ antiporter subunit D 
Protein accessionYP_319261 
Protein GI75676840 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG0651] Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.810394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAATC TGATGATCGC GCCGGTCGTG CTGCCGCTGT TTGCAGGCGC GATCATGTTG 
GCTCTCGGAG GAGAGCAGCG ACGCAACATC AGCGCCGCGC TCAATATCAT CACGTCTTTC
GCGCTGGTGG CGATCTCCAT CATCCTGCTG CGCGCGGCCG ATGTCGCCCC GACGGGCGTC
GCCGGCGTCT ATCGCCTGGG CGACTGGCCC GCGCCCTTCG CAATCGTGCT CGTGGTGGAC
CGGCTGGCGA CGCTCATGCT GCTGCTGACC AGCCTGCTCG CCGCCGCAGC GGCCGTATTC
TCCCTGGCGC GCTGGCACCG CGCGGGAGTG CTATTCCATC CCCTGTTTCA GTTCATGCTG
ATGGGAATCA ACGGCGCCTT CCTCACCGGC GATCTCTTCA ACCTGTTTGT TTTCATCGAG
GTCCTGCTCG CGGCTTCCTA TGGCCTGGCG CTGCATGGCT CGGGATCGGC ACGGGTCAAG
GCCGGGTTAC ACTACATCGC CGTCAACCTG GTGGCGTCGC TGCTGTTTCT GATCGGCGTC
AGCCTGATCT ACGGCGTGAC CGGCACGCTC AACATGGCGG ATCTGGCCAC CCGCATTCCG
GCGATCGGCG CGCAGGACCG CGCGCTGCTG GAGGCGGGAG CCGGCATCCT GGGCATCGCG
TTTCTCGTCA AGGCCGGGAT GTGGCCGTTG TGCTTCTGGC TTCCCGGCAC CTATGCGGCC
GCGCCACCGC CGGTGGCGGC AATTTTCGCG GTGCTGACGA AGGTCGGCGC CTACATCATC
ATCCGGCTGT CGCTGCTGCT GTTCGGTGAC GGCACGGGCG CATCGGCTCA ATTCGGGGAC
CAGTTGCTGC TAATGGGCGG CATGGCGACG GTGGCGTTCG GCGCGATCGG AAGCCTCGCG
TCGCAGGACA TGGCGCGGCT CGCTTCCTTT TCAGTACTGG TGTCGTCAGG CACGATACTC
GCCACGATCG GCCTGGGACA GGTCGGCGTG ACCGGAGCCG CCCTCTTCTA CCTGATCAGT
TCGACGCTCG GCCTGGGCGC GTTCTTTCTC CTGATCGAAC TTGTCGAGCG CGACCGCGAA
CCGGGCGCCG ACGTGCTTGC GGTGACCCGT GAACTCTACG GCGACGAGGA TGACTCGGAG
AATTCGCAGG AAACCGGAAT CGCGATCCCG GCGACGATCG GCATCCTCGG CGTGGCTTTC
ATCAGTTGCG CCCTCGTCAT CTCGGGCATG CCGCCGCTTT CCGGATTTGT CGCCAAATTC
GCGATCCTGA CGACCGCTCT CGGCTCTCCG GCGAACGAAC TCCCGCTCGC GATATGGATC
TTTCTTTTCC TGTTGATCGT TTCAGGATTG GCGGCGCTGA TCGCCATGAC GCGCGCCGGC
ATCCGGTCGT TCTGGGCTTC GCCCGACCGC ACCATCCCCC GCGTCCGCCT GATCGAGATG
GCGCCCGTTG CGGTCCTCCT GCTACTTTGC GCAATTCAGA CGGTCGAGGC GGGTCCGATT
ATGCGATTCA TGCAGGCGAC GGCGCAATCG CTGCACGCGC CTCACCACTA TGTCCGGGGA
GTTCTGGATT CCCCGGCCAA GCCCAGTGAC TCACGGGGGC CGACATGA
 
Protein sequence
MNNLMIAPVV LPLFAGAIML ALGGEQRRNI SAALNIITSF ALVAISIILL RAADVAPTGV 
AGVYRLGDWP APFAIVLVVD RLATLMLLLT SLLAAAAAVF SLARWHRAGV LFHPLFQFML
MGINGAFLTG DLFNLFVFIE VLLAASYGLA LHGSGSARVK AGLHYIAVNL VASLLFLIGV
SLIYGVTGTL NMADLATRIP AIGAQDRALL EAGAGILGIA FLVKAGMWPL CFWLPGTYAA
APPPVAAIFA VLTKVGAYII IRLSLLLFGD GTGASAQFGD QLLLMGGMAT VAFGAIGSLA
SQDMARLASF SVLVSSGTIL ATIGLGQVGV TGAALFYLIS STLGLGAFFL LIELVERDRE
PGADVLAVTR ELYGDEDDSE NSQETGIAIP ATIGILGVAF ISCALVISGM PPLSGFVAKF
AILTTALGSP ANELPLAIWI FLFLLIVSGL AALIAMTRAG IRSFWASPDR TIPRVRLIEM
APVAVLLLLC AIQTVEAGPI MRFMQATAQS LHAPHHYVRG VLDSPAKPSD SRGPT