Gene Nwi_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2654 
Symbol 
ID3676323 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2885067 
End bp2888009 
Gene Length2943 bp 
Protein Length980 aa 
Translation table11 
GC content64% 
IMG OID637714220 
Productputative monovalent cation/H+ antiporter subunit A 
Protein accessionYP_319259 
Protein GI75676838 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit 
TIGRFAM ID[TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGC CTTATGAAAC GATCCTCATC GTCGTTCTCG CGCTCCCCTT CGCCGGGAGC 
TGTGTTGCCG CGGTCCTTCC GAGCAACGCG CGCAACGCCG AAGCCTGGCT GGCCGGCGCG
GTGTCGCTCG CCTGCGTGGT GCTTCTGGCC GTCAGCTACC CTCAGATCGA CGACGGAGGG
GTGATCCGGC GTACCGTCGA ATGGATGCCC GAACTCGGCC TCGACTTCTA CCTGAGGATG
GACGGTTTCG CCTGGGTGCT CGCCGCACTG ATCGTCACCA TCGGGTTCCT GGTGGTGCTC
TATGCCCGCT ACTATATGTC TCCCCAGGAT CCCGTACCGC GGTTCTTTTC CTTTCTGCTC
GCCTTCATGG GAGCGATGCT CGGCATCGTG CTCTCCGGCA ACCTGATCCA GCTGGTTTTC
TTCTGGGAGC TGACCAGCCT CTTTTCCTTT CTGCTGATCG GCTACTGGCA CCAGACGGCG
CAGGCGCGGG ACGGCGCGCG CATGGCTCTG ATCGTGACCT CGGTCGGCGG ATTCTGCATG
TTCGCCGGCA TACTGATCCT GGGAAATATC GTCGGCAGCT ATGACCTCGA TCAGGTTCTC
GCGTCCGGGG ACAAGATCCG CGCGCATTCG CTCTACACTC CGACGCTCGT CCTCATTCTT
CTCGGAGCCC TTACGAAAAG CGCACAATTC CCGTTTCATT TCTGGCTCCC TCAGGCGATG
GCGGCGCCGA CGCCGGTTTC GGCCTATCTG CACTCCGCCA CCATGGTGAA AGGCGGGGTC
TTTCTTCTGG TGCGGCTGTG GCCAGCGCTG GGCGGAACGG ACGAGTGGCT TTGGCTCGTG
GGTTCGGCTG GACTGATCAG CTTCATGCTC GGGGCGTTCA TCGCTCTCTT CCAGCAGGAC
ATGAAGGGAC TGCTCGCCTA CTCGACCATC AGCCACCTCG GGCTCATCAC CCTGCTTATC
GGCCTCGACT CGCCGATCGC GCAGGTCGCC GCCATCTTTC ACCTGATGAA CCATGCGACG
TTCAAGGCGT CGCTGTTCAT GGCGGCAGGG ATCATCGATC ATGAAACCGG CACCCGCGAC
CTGCGCCGCC TGAGCGGCCT GCGCCGCTTC ATGCCGATCA CGGCGACGCT GGCGATGGTC
GCCGCCGCCG CCATGGCGGG CGTCCCGTTG TTGAACGGCT TCCTGTCGAA GGAGATGTTC
TTCGCCGAGA CAATCGAGAC CCACACCAAC TCGCTCCTGG ACGAGGCGCT GCCCTACATC
GTCACAGCGG CCAGCATGTT CACGGTCGCT TACTCGCTGC GGTTCATCGC CGAAGTGTTT
TTCGGTCCCC CGCCGAAAGA GTTGACACGC ACACCGCATG AACCGCCGTT CCTGATGCGC
TTTCCCGTCG GGCTCCTCGT TCTTGCCTGT CTCCTTGTCG GCATTGTCCC CAGCCTTACG
ATCGGCCCCC TGCTCCTCAC CGCGCTCCAT GCGGTCCTCG GCGACATCAT TCCCATTTAC
AGCCTTGCGA TCTGGCACGG CTTCACGCCC GAGTTCGTGA TGAGTCTGGT CGCGATCACC
GGCGGAATCG CCATCTATCT GATGCTCAGG TCGTATCTGC TGATCGCGGA AGGGCCGCCG
CTTTTGCGGT ATATCCAGGG TCAGCGCATT TTCGACCGCG TGCTCGTCGC CATCTCATGG
CAACTCGCAA GACGGCTGGA GGAATTGCTG GGCACGCGCC GCCTGCAACC ACAGTTGCGG
CTGGTGTTCT GCGCGGCTTT GCTGGCCGGG ATCGCGCCGA TGTTCGCTCA CGGCATAGAT
ATCTGGGGAG CGCCGAGAAC GTCTTTCGAT GTCACATTCG CGCTGATCTG GGCGGTAGGA
GGCACCTGCG CGCTGGCCGC GGCCTATCAG GGCAAATTCC ACCGCTTCGC GGCCCTCATT
TTCATGGGCG GCGCGGGTCT GGTGACGTGC GTCAGCTTCG TCTGGCTGGC CGCGCCTGAT
CTCGCCCTGA CCCAACTGGC GGTCGAGACC GTCACGACCG TACTGCTCCT TCTCGGGCTG
CGTTGGCTGC CGAAGCGCAT CGAGAAATTT CCCGCGGCCG ACGTACCGGA GCGCGATCTC
TCCTCGCGCC GCTACCGCGA CCTCGGCATC GCGATCGCAT CCGGAGGCGG GCTCGCGGCG
CTGGCCTACG CGGTGATGAC GCGAGCGGCG CCCGACAGCA TCGCGCGGTT CTTTGTCGAG
AACGCCTACA CGCTGGGCGG CGGGACCAAC ATTGTAAATG TCATCCTCGT CGACTTTCGT
GCGTTCGACA CTTTCGGCGA GATCACTGTG CTCGGCATCG TCGCGCTGAC CGTCTATGCC
TTGCTGCGGC GATTCCGGCC CGCCGCCGAA AGCATTCCGG TCCCCGAGCA GCAGTCCAGT
CAGGATCTTT ACGATGAGGC TCAACCCAGT CGCGAGAAGG GCGACACGCT CAGGAGCGCG
ATGGCCGTCC CCCGGCTCAT GATGGCATTG CTTTTCCCGG TGATCTGCAC GACAGCGGCT
TTTCTCCTGC TGCGGGGCCA TGACCTGCCC GGTGGCGGAT TCGTCGCCGG CATCACGATG
GCCGTCGCGT TCATCCTCCA GTACATCGCT CGCGGAACCA CCTGGACGGA GGACCATCTG
CGCATTCTGC CCGTGCACTG GATGGGCGCG GGCTTGCTCA TGACCGCCGG CGTCGGCGTG
GGCGCGTGGT GGTTCGAGCG GCCTTTCCTG AGTTCGTCAT TCTCATATCA CGAGATCCCC
TGGATCGGCC CGGTGCCGGT GGCCAGCGCG CTTCTCTTTG ATCTCGGGGT CTTCGCATTG
GTCGTCGGCG CCACCGTCCT GATGCTGATC GCGATCGCGC ACCAGACCGT GCGCAGTCAT
CGGACGCCTT CCAGCCGCGC ATCCAGCGCC GCGGCCGCAT CCGCAACGGC CGAGGTGCGA
TAG
 
Protein sequence
MTMPYETILI VVLALPFAGS CVAAVLPSNA RNAEAWLAGA VSLACVVLLA VSYPQIDDGG 
VIRRTVEWMP ELGLDFYLRM DGFAWVLAAL IVTIGFLVVL YARYYMSPQD PVPRFFSFLL
AFMGAMLGIV LSGNLIQLVF FWELTSLFSF LLIGYWHQTA QARDGARMAL IVTSVGGFCM
FAGILILGNI VGSYDLDQVL ASGDKIRAHS LYTPTLVLIL LGALTKSAQF PFHFWLPQAM
AAPTPVSAYL HSATMVKGGV FLLVRLWPAL GGTDEWLWLV GSAGLISFML GAFIALFQQD
MKGLLAYSTI SHLGLITLLI GLDSPIAQVA AIFHLMNHAT FKASLFMAAG IIDHETGTRD
LRRLSGLRRF MPITATLAMV AAAAMAGVPL LNGFLSKEMF FAETIETHTN SLLDEALPYI
VTAASMFTVA YSLRFIAEVF FGPPPKELTR TPHEPPFLMR FPVGLLVLAC LLVGIVPSLT
IGPLLLTALH AVLGDIIPIY SLAIWHGFTP EFVMSLVAIT GGIAIYLMLR SYLLIAEGPP
LLRYIQGQRI FDRVLVAISW QLARRLEELL GTRRLQPQLR LVFCAALLAG IAPMFAHGID
IWGAPRTSFD VTFALIWAVG GTCALAAAYQ GKFHRFAALI FMGGAGLVTC VSFVWLAAPD
LALTQLAVET VTTVLLLLGL RWLPKRIEKF PAADVPERDL SSRRYRDLGI AIASGGGLAA
LAYAVMTRAA PDSIARFFVE NAYTLGGGTN IVNVILVDFR AFDTFGEITV LGIVALTVYA
LLRRFRPAAE SIPVPEQQSS QDLYDEAQPS REKGDTLRSA MAVPRLMMAL LFPVICTTAA
FLLLRGHDLP GGGFVAGITM AVAFILQYIA RGTTWTEDHL RILPVHWMGA GLLMTAGVGV
GAWWFERPFL SSSFSYHEIP WIGPVPVASA LLFDLGVFAL VVGATVLMLI AIAHQTVRSH
RTPSSRASSA AAASATAEVR