| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2647 |
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| Symbol | |
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| ID | 3676316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2877682 |
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| End bp | 2879658 |
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| Gene Length | 1977 bp |
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| Protein Length | 658 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637714213 |
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| Product | PAS sensor diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_319252 |
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| Protein GI | 75676831 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTGGTT ATCTCTTGGG AAGGCAGAAG GTGGTGCCGT ATGTGACCGC GACCGCCGTT
GCTGCCAGCA AGAGCCTGAA AGTCCGGAAA TTTCCCCTTT CAGACGCGAT GAAGGTTGGG
AAGTCCATGT CCGGCGCGCC CGAGCGAAGT GAGTTTTCCG TTATCGCTGG TGGGAGCGGA
CCGACACCTC CCGATGAGTC CGGGACCGGC CCGAATGACT GTGGTGTCGA AGCGGGCGAC
CCCTCGCGGG TGAATTTCCT CGCCGAGGTG GTCAGATTAC TTCCGACAGC CGTGACGGTT
CAGGACGAGC AGGGACATTT CGTGTTCGTG AATGCGGCCG CCGCGGCCCA GTTCAACGTG
CCCGCGGGCG CTATCGTCGG AACCGGATCA GGCGCGCTGC TCCCCTCAAA AGAGTTGAAC
GATCGCGTCA ATCTCGCGCG CGGGGTGCTG CAATCGGGGC GGATCCGGAT ATCCGAGGAA
CTCATTCGGA CGGATCATAC GACAAAGACC TATCTGACCA CGCATGAGCC TGTCCGGATT
TCGGACAGGA ATCTCATGCT GTCGAGCTCG GTCGATATCA GCGGTCAGAA GGCTGTCGAG
GAGGAGCTTT TTCGTTGTGC CTACTTTGAC GATCTGACGG GTCTTCCGAC CCGGCGCGTC
ATCGAGCAGC ACGCCAACAG CCTCATCCGT GAGGGAGAAC AACCCGTCAG GTTTGCGGTT
GCTTTCCTTG ACATCGACAA TTTCAAGCAC ATCAACGACT ATTACGGCCA TGCATCCGGC
GACGAGCTTC TGATCGAGGT TGCGAGGCGC CTGAGTTTCG GCCTTCGCGG CACCGATATG
CTGTCTCGGA TCAGCGGCGA CGAGTTTCTG CTTCTGCTCA ATCCGGTCCA AAGCGACGCC
GAACTCGCCG ACTATATTGG ATTTTTGCTG CAGCGCCTCA AGGCGCCGTT CTTCATCGAG
GGATCGGAGC TGTTCGCCTC CGCATCGATC GGGGTGAGCA TTTATCCGGA TCACGGCGAC
AGCTACGAGG TTCTGCGCCA GAACGCCGAT ACCGCCATGT ATCACATCAA GAACGAAAAA
AAGGGCGGCG CCGTCATCTT CGATTCCGGA ATGCAGCGCG AGGCGCTGAC GCGGATGGAG
ATCGAGCAGT CGCTGCGGCT TGCGATTCTC GACAAGCGGT TCTATTGCGC GTTCCAGCCC
AAGGTCGACA TCAGAACCCA GCAGGTCAGG GGCATCGAGG CGCTGGTTCG ATTGCGCAAT
GATGACGGCG TCATCCAGGC GCCGGGAACG TTCGTCGATC TCGCGATTGA GCTCGGCCTG
ATCGACGAGT TGACGCATCT GGTTCTGGCC GAGATCATGA GGTCCATCGA CCTCATCGAC
GAAAGGTTCG GCGCGGGCGT CAGCATCAGC ATCAACGTCG CCGCCAAGCA GGCGGGAAAC
GTGGCCTTCA TGACATCCTT CGCGCGCGCG CTGGAGAAAA CCGGCTGCCC GGCGCGATTC
GTCGTCGAGG TCACGGAAGA TGCGTTCGTG GCGAAAACCC GTTTCCAGAC GGAAATTCTG
CCCGTCCTGC GAAGCTTGGG CGTCGGGATC TCCATCGATG ACTTCGGTAT CGGATATTCC
TCGCTCTCGG CTCTGGCCGA TATCACCGCT GACGAAATCA AGATCGACCG GTCATTCATC
GTCGATATTC ACAAGCGCCC GCGCAGCCAG GGTATTTTGA AGGCCATTGA ATCTCTCGGT
GATGCATTGG GAATGACGGT GATCGCGGAG GGCGTCGAGA AGTTCGAGGA ACTCGCTTAT
TTGCAGGCAG CGACGCGGAT CAAGTATGCG CAGGGTTTCT ATTTCTCGGA GCCCGTCTTT
CTCGAAGATC TCGAATCGGA CAAGCGCGCG GTGAGCAAAC GAAGCACGAG TTCGATTGGC
CGTCCGCTGC AGGAGAACCG GCTGACTTAT TCCCGCGCCA CCGGCTACAG CCCCTAG
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| Protein sequence | MPGYLLGRQK VVPYVTATAV AASKSLKVRK FPLSDAMKVG KSMSGAPERS EFSVIAGGSG
PTPPDESGTG PNDCGVEAGD PSRVNFLAEV VRLLPTAVTV QDEQGHFVFV NAAAAAQFNV
PAGAIVGTGS GALLPSKELN DRVNLARGVL QSGRIRISEE LIRTDHTTKT YLTTHEPVRI
SDRNLMLSSS VDISGQKAVE EELFRCAYFD DLTGLPTRRV IEQHANSLIR EGEQPVRFAV
AFLDIDNFKH INDYYGHASG DELLIEVARR LSFGLRGTDM LSRISGDEFL LLLNPVQSDA
ELADYIGFLL QRLKAPFFIE GSELFASASI GVSIYPDHGD SYEVLRQNAD TAMYHIKNEK
KGGAVIFDSG MQREALTRME IEQSLRLAIL DKRFYCAFQP KVDIRTQQVR GIEALVRLRN
DDGVIQAPGT FVDLAIELGL IDELTHLVLA EIMRSIDLID ERFGAGVSIS INVAAKQAGN
VAFMTSFARA LEKTGCPARF VVEVTEDAFV AKTRFQTEIL PVLRSLGVGI SIDDFGIGYS
SLSALADITA DEIKIDRSFI VDIHKRPRSQ GILKAIESLG DALGMTVIAE GVEKFEELAY
LQAATRIKYA QGFYFSEPVF LEDLESDKRA VSKRSTSSIG RPLQENRLTY SRATGYSP
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