| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2646 |
|---|
| Symbol | |
|---|
| ID | 3676315 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2875634 |
|---|
| End bp | 2877523 |
|---|
| Gene Length | 1890 bp |
|---|
| Protein Length | 629 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637714212 |
|---|
| Product | glycoside hydrolase 15-related protein |
|---|
| Protein accession | YP_319251 |
|---|
| Protein GI | 75676830 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAACC GCTCGCCGAT GAATAATACT GACCGTTTCG TCATCCTGTT TCGGCTCGCG
TCCTGTTTTC AGCTTTACCC GCCGAGATCT GCCAAATTGC CAAGCAGAAT CGAAGACTAC
GGAATCATCG GCGACGGCGA GACCGTCGCG CTCGTCGACC GGACGGGATC GATCGACTGG
CTTTGCTGGC CATGCTTCGA TTCCGATGCC TGTTTTTCCG CCCTTCTGGG CGATGAGCGC
AATGGCCATT GGCGGATCGC TCCTTCGGAA AAGATCGAGC ATTCGAGCCA TGGCTATCGC
GGAGATGGCC TTATCCTCGA AACCCGCTTT GAGACGGCCG GCGGCGCGGT CACTTTGATC
GACTTCATGC CGCCACGCGA CACGGCGACC GATATCGTCC GCCTCGTCCG GGGGGACCGC
GGTCGCGTGA GGATGCACAT GGATTTGGTG ATCCGGTTCG GTTTCGGAAA AGACGTGCCA
TGGGTCCGCC GTACCGAGGA TCGGGCGCTG CTCGCCATCT GCGGGCCGGA CATGCTGGTG
CTGCGCACGC CGGTCGAGAC GCGCGGCGAG AACATGACCA CCGTCGCCGA CTTCGAGGTC
AGCGCAGGGC AGACGATCCC GTTCGTGATG GCCTACAGCG CATCGCATCT GGCCGTTCCA
GCCCCGATCG ATCCCGCGGC GGCACTGCGC GACACGGAGG CGTTCTGGCG CGACTGGTGC
GGAAAGTTCG ACTATGACGG TCCGTATCGT GATCTTGCGA TGCGCTCCCT GGTTGCCCTG
AAAGCCATGA TCTATGCGCC CTCCGGCGGC ATCGTCGCGG CGCCCACAAC CTCGCTTCCC
GAAAAGCTCG GCGGCGCGCG CAACTGGGAC TACCGGTTCT GCTGGCTGCG CGACGCGACC
TTCACGCTGC TCGCGCTGAT GAACAGCGGC TATCACGACG AAGCTTCGGA CTGGCACGAC
TGGCTGCTGA GATCGGTCGC CGGCTCGCCC GCAGACATGC AGATCATGTA CGGCATCCTC
GGGCAACGTC GCCTGACGGA ATGGGAAGCC GACTGGCTGC CCGGCTATGA GGGCGCGCGG
CCGGTCAGGA TCGGAAACGC GGCCTATGCC CAGTTGCAGC TTGATGTCTT CGGCGAGTTG
ATGGACGCGT TCCACCAGTC GAGGGAGGCG AACCTCAAAT TGCGTGAGCC GACCTGGGAT
CTGGAATGCC AGTTGCTCGA GCATCTCGGC CGGATCTGGA ATGAAACGGA TTCCGGCATC
TGGGAGTTGA GGGGACCTGG CAAGCACTAC GTCTCCTCGA AGGTGCTGGC CTGGGTGGCG
TTCGACCGCG GCGTCAAGAG CGTGGAGCAT TTCGGCTTTC ACGGGCCGGT CGAGCGCTGG
CGTGAACTGC GGGAGATGAT TCATCGCGAC GTCTGCGAAA AGGGTTTTGA TCGCGAACAA
AACACTTTCG TCGAATCCTA CGGCTCGAAG CTGCTTGATG CCAGCACGCT TCTTATTCCA
TCGGTCGGCT TTCTGCCGGC TTCCGATCCC CGTGTCGCGG GAATGCTGGC GGCGGTGGAG
CAGCACCTGA TGCCGGACGG ATTCGTGCTC AGGCACGATC CGCGCGCGGT GACGGACGAG
CAGCCGCCGA TCGAGGGAGC TTTTCTGGCC TGTACGCTAT GGCTCGCCGA CGCTTATGTG
CTGCGCGGCG ATATCGAGCG CGCCGAGGTG CTGCTGAAGC GGGTTGCGGG GGTAGCGAAC
GATCTTGGCC TGCTGTCGGA AGAGTACGAT ACGGTCGCCC GTCGCATGAC CGGAAATTTC
CCGCAGGCGT TGACCCATAT TGCGCTGGTC AACACCATCC ACAATCTCAA CGCCGCCCGC
AAGCCGGCGA TGCAGCGGGC GAAGGCTTAG
|
|---|
| Protein sequence | MANRSPMNNT DRFVILFRLA SCFQLYPPRS AKLPSRIEDY GIIGDGETVA LVDRTGSIDW
LCWPCFDSDA CFSALLGDER NGHWRIAPSE KIEHSSHGYR GDGLILETRF ETAGGAVTLI
DFMPPRDTAT DIVRLVRGDR GRVRMHMDLV IRFGFGKDVP WVRRTEDRAL LAICGPDMLV
LRTPVETRGE NMTTVADFEV SAGQTIPFVM AYSASHLAVP APIDPAAALR DTEAFWRDWC
GKFDYDGPYR DLAMRSLVAL KAMIYAPSGG IVAAPTTSLP EKLGGARNWD YRFCWLRDAT
FTLLALMNSG YHDEASDWHD WLLRSVAGSP ADMQIMYGIL GQRRLTEWEA DWLPGYEGAR
PVRIGNAAYA QLQLDVFGEL MDAFHQSREA NLKLREPTWD LECQLLEHLG RIWNETDSGI
WELRGPGKHY VSSKVLAWVA FDRGVKSVEH FGFHGPVERW RELREMIHRD VCEKGFDREQ
NTFVESYGSK LLDASTLLIP SVGFLPASDP RVAGMLAAVE QHLMPDGFVL RHDPRAVTDE
QPPIEGAFLA CTLWLADAYV LRGDIERAEV LLKRVAGVAN DLGLLSEEYD TVARRMTGNF
PQALTHIALV NTIHNLNAAR KPAMQRAKA
|
|---|
| |