Gene Nwi_2618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2618 
Symbol 
ID3674428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2847437 
End bp2847907 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content65% 
IMG OID637714184 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_319223 
Protein GI75676802 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0219] Predicted rRNA methylase (SpoU class) 
TIGRFAM ID[TIGR00185] rRNA methylase, putative, group 2 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.106137 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.848302 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGATCG CACTATTTCA ACCCGATATC CCGCAGAACA CCGGGACAAT TCTGCGTCTT 
TGCGCTTGCC TCGGCGTTGA AGCCCACATC ATCGAGCCCG CCGGATTTCC GGTCTCGGAC
CGGCATTTCC GCCGGGCGGG CATGGACTAC CTCGACCAGG TCACCATCGT GCGCCACGAT
TCCTGGCTGA AATTCGAGCA ATGGCGCGCC GGCGACGGCG GGCGGCTGGT CCTGTTCACG
ACCAGGGGCG CCCTGCCCTA TCTGGACCAT CGTTATGCGG CTACCGATAT TCTGCTGTTC
GGCCGCGAAA GCGCCGGGGT CCCGGATGCC GTGGCAGCCG CCGCGGACGC ACGTCTGGTG
ATACCCTTGA GGCCCGCACT ACGTTCGCTG AACGTCGCCA TGGCAGCCGC CATGGCCGTG
GGCGAGGCTC TGCGGCAGAC AGAACCGGCC CTGACGGAAA GGATCCCGTG A
 
Protein sequence
MRIALFQPDI PQNTGTILRL CACLGVEAHI IEPAGFPVSD RHFRRAGMDY LDQVTIVRHD 
SWLKFEQWRA GDGGRLVLFT TRGALPYLDH RYAATDILLF GRESAGVPDA VAAAADARLV
IPLRPALRSL NVAMAAAMAV GEALRQTEPA LTERIP