Gene Nwi_2581 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2581 
Symbol 
ID3675615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2805170 
End bp2806663 
Gene Length1494 bp 
Protein Length497 aa 
Translation table11 
GC content65% 
IMG OID637714147 
ProductFAD linked oxidase 
Protein accessionYP_319186 
Protein GI75676765 
COG category[C] Energy production and conversion 
COG ID[COG0277] FAD/FMN-containing dehydrogenases 
TIGRFAM ID[TIGR00387] glycolate oxidase, subunit GlcD 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.209325 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA TGATGCCCGC CTCGGATCAA GCGGTCCTCG ACCGCCGCGA CGCCATAGTC 
GCGGACTTGC GCGCGATCGT GCCGGGTGAG GGCGTCATCG CCAGCGCGGC GGAAATGTTG
CCGTATGAAT CGGATGCCCT GACCGCCTAT CGGCAGCCGC CGATGGTGGT GGTGTTGCCG
GAAACCACGG AGCAGGTGTC GCGCGTTCTG AAATACTGCT TCGATAACGG CATCAAGGTG
GTGCCGCGCG GCTCCGGCAC CTCGCTGTCG GGCGGCGCGC TGCCGCTGGC CGACGCGGTG
CTGCTCGGTC TCGGCAAGTT CAAGCGCATT CGTGAGATCG ATTTCGATAA CCGCGTCGTG
GTCACCGAGC CCGGCGTCAC CAACCTCGCC ATCAGCCAGG CGGTGGCCCA CGCCGGGTTC
TACTACGCGC CGGACCCCTC GTCGCAGATC GCCTGCTCGA TCGGCGGCAA CATCGCGGAG
AATTCCGGCG GCGTTCACTG CCTGAAATAC GGTATGACGA CGAACAACGT GCTCGGCTGC
GAGCTTGTGC TGATGTCGGG CGAGGTCCTG CGCATCGGCG GCAAGGCGCC CGAGCAGGCG
GGCTATGACC TGATGGGCAT CATCACCGGG TCCGAAGGTT TGCTCGGCGT CGTCACCGAA
GTCACGGTCC GCATTCTGCG GAAGCCGGAA ACCGCGCGGG CGCTGATGGT CGGATTCTCA
CAGGTCGAAG CGGCGGGCGA ATGCGTGGCG CGCGTCATCG GCGCCGGCAT CATTCCCGGC
GGCATGGAGA TGATGGACCG GCCGGCGATC CATGCCGCCG AAGCCTTCGT CAACGCCGGC
TACCCGCTCG ATGTCGAGGC GCTGCTGATC ATCGAGCTTG ACGGTTCGAG CATCGAGGTC
GACGAACTCA TCAAGCGCGT CGAGGCCATC GCGCTCGGCT GCGGATCGAC CACCTGCCGG
ATTTCCGGTT CGGAAGCGGA GCGCGACCTG TTCTGGGCCG GCCGCAAGGC GGCTTTCCCG
GCGGTCGGCC GTATCTCTCC CGACTATATC TGCATGGACG GCACCATTCC GCGCGGCGCG
CTGCCGAGGG CGCTGGCGCG CATTCGCGAG TTGAGTGAAA AATACGGTCT CGGCGTCGCC
AATGTCTTTC ATGCGGGAGA CGGCAATCTT CATCCGCTCA TTCTGTATGA CGCCAATAAG
CCCGGCGAGA TGGACAAGGC GGAGGCGTTC GGCGCGGATA TTCTGCGGTG CTGCGTCGAA
CTGGGCGGCG TCCTCACCGG CGAGCACGGT GTCGGCATCG AGAAGCGGGA GCTCATGCCG
CACATGTTCA GCGAGGCCGA TCTCAGCCAG CAGCAGCGGC TGAAATGCGC GTTCGACGCC
CAAGGTCTTC TCAATCCGGG CAAGGTGTTT CCGACGCTGC ACCGCTGCGC CGAACTCGGC
CGCGTTCATG TGCATGGCGG CAGGCTGCCG TTTCCGGACC TGCCGAGATT CTGA
 
Protein sequence
MTIMMPASDQ AVLDRRDAIV ADLRAIVPGE GVIASAAEML PYESDALTAY RQPPMVVVLP 
ETTEQVSRVL KYCFDNGIKV VPRGSGTSLS GGALPLADAV LLGLGKFKRI REIDFDNRVV
VTEPGVTNLA ISQAVAHAGF YYAPDPSSQI ACSIGGNIAE NSGGVHCLKY GMTTNNVLGC
ELVLMSGEVL RIGGKAPEQA GYDLMGIITG SEGLLGVVTE VTVRILRKPE TARALMVGFS
QVEAAGECVA RVIGAGIIPG GMEMMDRPAI HAAEAFVNAG YPLDVEALLI IELDGSSIEV
DELIKRVEAI ALGCGSTTCR ISGSEAERDL FWAGRKAAFP AVGRISPDYI CMDGTIPRGA
LPRALARIRE LSEKYGLGVA NVFHAGDGNL HPLILYDANK PGEMDKAEAF GADILRCCVE
LGGVLTGEHG VGIEKRELMP HMFSEADLSQ QQRLKCAFDA QGLLNPGKVF PTLHRCAELG
RVHVHGGRLP FPDLPRF