Gene Nwi_2556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2556 
Symbol 
ID3675271 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2780516 
End bp2781808 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content66% 
IMG OID637714122 
Productthree-deoxy-D-manno-octulosonic-acid transferase 
Protein accessionYP_319161 
Protein GI75676740 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1519] 3-deoxy-D-manno-octulosonic-acid transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.749366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGA CGCTGCGCCT CTACCGCAGG CTGGCTGTCG CTGCCGGGCC ACTGGCGCCC 
CTGCTTCTGA AACGGCGTTT GAAACAGGGC AAGGAAGACC CGGCGCGTAT CAATGAGCGC
CGGGGCGTCG CCCGGCAGCC CCGACCCGCG GGCCCGCTGG TCTGGATCCA TGGGGCCAGC
GTTGGCGAGG TGCTGGCAGC CGCCGCGCTG ATCGAGCGGC TGCGCGCGCT TGATATCGGC
GTTTTGGTCA CGTCGGGTAC GGTCACGTCG GCAGCCGTCG CCGCGAAGCG GTTCCCGCCG
GATATCATTC ACCAGTATAT CCCCTACGAC TCGCCCCGCT TCGTGGAGCG TTTTCTCGAT
CACTGGCAAC CCGGTCTTGC GCTCTTTATC GAGTCGGACC TGTGGCCGAA CCTGATTCTG
GCTGGCGCGA GCCGCCGTGT ACCGATCGTG CTGATCAACG GGCGGATGTC GCGTCGTTCA
TTCCCGCGCT GGCGGCGGGC TTCCCGAACG ATCGGGGCGT TGTTGAGCCG GTTCGATATC
TGCCTTGTCC AGTCGGAAAT CGACGCGGAG CGCTTCACGG CGCTCGGGGG GCGCAACGTC
GTCATCACCG GCAACCTCAA GCTCGACGTC CAGCCGCCGC CGGCCGACGA GACCAGGCTG
GAACGATTGT TGTTCGTGAC CCGCGGCCGT CCGGTCGTGG TGGCGGCCTC GACCCATCCG
GGCGAGGAAG AAATACTGCT CAACGCCCAT CAAACGCTCG TGCGTGATTT TCCGTCGCTG
CTGACCGTGA TCGTTCCGCG CCACCCCGAT CGGGGCGAGG CGATCGCCCG GATGGTCATC
GCTTCCGGCG CGCAGGCGGC GCGGCGCTCG CTGGAGCAAC TGCCGACGGC GAGGACAAAC
ATCTATATCG CCGACACCAT CGGCGAAATG GGATTGTTCT ACCGTTTGGC GCCGATCGTT
TTCATGGGCG GCTCCCTGGT GCCGCATGGC GGCCAGAATC CGATCGAGGC GGTCAAGCTC
AAAGCGTCGA TCGTGCATGG ACCGCATGTC TTCAATTTTC CGGATGTCTA TGGCGCGCTC
GACAGCGCGG GCGGCGCGTG CCGGGTCGAC GACGGCGATG CGCTGACGAA GCAGCTTGGC
TACCTTCTCA ACGATTCCGC CGCGCGCGAC GCCACTGCGA CGGCGGCGTC TCAGGTGGTG
GAAAAACTTG CCGGTGCGCT CGATCGCACG CTGGCCGCGC TCGAACCGTA TCTTCTGCAG
TTGCGGCTTG AACGACGGGC GGCCGATGCG TGA
 
Protein sequence
MPATLRLYRR LAVAAGPLAP LLLKRRLKQG KEDPARINER RGVARQPRPA GPLVWIHGAS 
VGEVLAAAAL IERLRALDIG VLVTSGTVTS AAVAAKRFPP DIIHQYIPYD SPRFVERFLD
HWQPGLALFI ESDLWPNLIL AGASRRVPIV LINGRMSRRS FPRWRRASRT IGALLSRFDI
CLVQSEIDAE RFTALGGRNV VITGNLKLDV QPPPADETRL ERLLFVTRGR PVVVAASTHP
GEEEILLNAH QTLVRDFPSL LTVIVPRHPD RGEAIARMVI ASGAQAARRS LEQLPTARTN
IYIADTIGEM GLFYRLAPIV FMGGSLVPHG GQNPIEAVKL KASIVHGPHV FNFPDVYGAL
DSAGGACRVD DGDALTKQLG YLLNDSAARD ATATAASQVV EKLAGALDRT LAALEPYLLQ
LRLERRAADA