Gene Nwi_2542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2542 
SymbolileS 
ID3675257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2762248 
End bp2765247 
Gene Length3000 bp 
Protein Length999 aa 
Translation table11 
GC content64% 
IMG OID637714108 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_319147 
Protein GI75676726 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAA AGAAGAAAAA TTCCGACGCC CCCGATTACG CCAAAACCCT GTTTTTGCCG 
CAGACGGAAT TCCCGATGCG CGCCGGGCTG CCGCAGCGCG AGCCGGACAT CCTGAAGCGC
TGGACCGATA TCGATCTTTA CGGGCAGTTG CGCGCGTGCG CGAAAGGGCG GCCGAAATTC
GTGCTGCACG ACGGCCCGCC CTACGCCAAC GGCAGCATCC ATATCGGCCA CGCGCTCAAC
AAGATCCTCA AGGACGTCGT CACCAAGAGC CAGCAGATGC TGGGCCACGA TTCCAACTAC
GTACCGGGAT GGGATTGCCA TGGCCTGCCG ATCGAATGGA AGATCGAGGA GGAGAACTAC
CGCTCCAAGG GCAAGACGAA GCCGAACTTC AAGGACCCCG CGGCGATGGT CGCGTTCCGC
AAGGAATGCC GCGCCTATGC AGAGCACTGG CTGAACGTGC AGCGCGAACA GTTCAAGCGT
CTCGGCATCA TCGGCGACTG GGATCATCCC TACGCCACCA TGACCTATCC GGCCGAGGCA
CAGATCGCGC GCGAACTGAT GAAGTTCGCC GCCAACGGTA CGCTCTATCG CGGCTCCAAG
CCGGTGATGT GGAGCGTGGT GGAGAAGACC GCGCTGGCGG AAGCCGAGGT CGAGTACGAG
GATCACACCT CGGACACGGT GTGGGTGAAG TTTCCGGTGA CCTCGCCGGC GCACGGCGCA
TTGTCGCAAG CGAGCGTCGT GATCTGGACC ACCACGCCGT GGACGCTGCC GGGCAATCGC
GCCATCAGCT TCTCGAACAA GATCGCCTAT GGTCTTTACA AGATCACCGA TGCCCCCGCC
GACAACTGGG CGAAGACCGG CGATGTCCTG ATCCTGGCGA ACAAACTCGC CGGCGAGGTG
TTCAAGCAGG CGCGGGTCAC GGCCTACGAG AAGGTTCGTG ACATTCCCGC CGACACGCTG
GACGCGGTGG AATGCGCGCA TCCGCTGAAA GGCCTGTCCG GCGGCTATGA ATTCACTGTC
CCCCTGCTGG ACGGCGATCA CGTCACCGAC GACACCGGCA CCGGGTTCGT TCACACCGCG
CCCGGACACG GCCGCGAGGA CTTCGACATC TGGACGGCGA ATGCCCGCGA ACTCGAGGTG
CGCGGCATCA GTTCGACCAT TCCCTACACC GTCGACGAGA ACGGCGCGCT GACCGCGCAG
GCCCCCGGCT TCGAAGGCAA GCGCGTCATC GACGACAAGG GCAACAAGGG CGACGCCAAC
GAGGCCGTCA TCAAGGCGCT GGTCGAACGC AATAGGCTGC TGGCGCGCGG GCGCTTGAAA
CATCAGTATC CTCATTCGTG GCGCTCGAAG AAGCCGGTGA TCTTCCGCAA CACGCCGCAA
TGGTTCATCG CGATGGACCG GGACATCGCT GATGACGGCA AGGCGAATCA CGGCGACACC
CTCCGCGCCC GCGCGTTGCA AGCCATCAGC GTCACCCGAT GGGTGCCGCC GGCCGGGCAA
AACCGCATCA CCGGCATGAT CGCCAACCGT CCCGACTGGG TGATCTCCCG CCAGCGCGCC
TGGGGCGTGC CGATCGCGGT GTTCGTGCGC GAGAAGGGCG ACGGCTCCGC CGAAGTTTTG
ATCGACGACG CCGTCAACCG GCGCATCAGC GACGCCTTCG AGAAGGAAGG CGCGGACGCC
TGGTACGCCG AGGGCGCTCG CGAGCGTTTC CTGGGTGATC GCGCGGGCGA GGACTGGAGC
AAGGTCGACG ACATTCTCGA CGTCTGGTTC GACTCCGGTT CGACCCACGC CTTCGTGCTG
GAAGATCCGG CGCATTTTCC CAGCCTCAGG GACATCAAGC GCAAGGCCGA TGGCGGCCGG
GATACCGTGA TGTATCTGGA AGGCAGCGAC CAGCATCGCG GCTGGTTTCA TTCCTCGCTG
CTGGAAAGCT GCGGCACCCG CGGCCGTGCG CCTTATGACA TCGTGCTGAC GCACGGCTTC
ACGCTCGACG AGAACGGCCG CAAGATGTCG AAATCACTCG GCAACACCGT CGATCCGCAG
AAGGTCATCA AGGATTCGGG CGCCGACATC CTGCGGCTGT GGGTCTGCGC GACGGATTAT
GCCGACGACC AGCGCATCGG CCCCGAGATT CTTAAGAACA CCATCGAGAC CTACCGCAAG
TTACGCAACA CCATCCGCTG GATGCTCGGC ACGCTGCATC ACTTCGATCG CGGCGAGGCG
GTCGCGTTCA CCGAGATGCC CGAGCTTGAG CGCCTGATGC TACATCGGCT TGCGGAGCAG
AGCGCGCTGG TGCGCAGCGC TTACGCGGAG TTCGACTACA AGACCGTGGT CGCTAGCCTC
GCGGCCTTCA TGAACACCGA ACTGTCGGCG TTCTATTTCG ATATCCGCAA GGATACGCTT
TATTGCGATC CGCCGTCGTC GCCGGCGCGC AAGGCGGCGC TGACCGTGAT CGACAAGCTT
TGCGACGCGA TCCTGAAATG GCTGGCGCCT GTGCTTTCGT TTACGACCGA AGAGGCGTGG
CGGCTGTACC GGCCGGATGC GGAGCCGTCC GTGCATCTGA CGCTGTTCCC GGAGAGCTTC
GACAATTTCC GGGACGACTC CCTGGCCGCG AAATGGGAGA CCGTCCGCGC CGTGCGCAGC
GTCGTCACCG GCGCGCTGGA ACTGGAACGG GCCGCCAAGC GGATCGGCTC CTCGCTCGAG
GCTTCGCCGA TCGTCCATGT CGCCGACCGC GCGATGCTTG GCACGTTGTT CGACATCGAT
CTCGCCGAGG TCTGTATCAC GTCGAATTTT GAAGTGCGCG AAGGGGACGC ACCGGACGGC
GCTTTCCGCT TGCCGAACGT CCAGGGCGTC GCCGTGGTGG TCGAGAAAGC CGCGGGCACC
AAGTGCGCCA GGTCGTGGAA GATCCTGCCG ACCGTCGGCA GCGACAGCGA GTACCCGGAT
GTATCGCCGC GCGACGCGCA GGCGTTGCGG GAGTGGAAGG CGCTGGGAGT CACCGTGTGA
 
Protein sequence
MTEKKKNSDA PDYAKTLFLP QTEFPMRAGL PQREPDILKR WTDIDLYGQL RACAKGRPKF 
VLHDGPPYAN GSIHIGHALN KILKDVVTKS QQMLGHDSNY VPGWDCHGLP IEWKIEEENY
RSKGKTKPNF KDPAAMVAFR KECRAYAEHW LNVQREQFKR LGIIGDWDHP YATMTYPAEA
QIARELMKFA ANGTLYRGSK PVMWSVVEKT ALAEAEVEYE DHTSDTVWVK FPVTSPAHGA
LSQASVVIWT TTPWTLPGNR AISFSNKIAY GLYKITDAPA DNWAKTGDVL ILANKLAGEV
FKQARVTAYE KVRDIPADTL DAVECAHPLK GLSGGYEFTV PLLDGDHVTD DTGTGFVHTA
PGHGREDFDI WTANARELEV RGISSTIPYT VDENGALTAQ APGFEGKRVI DDKGNKGDAN
EAVIKALVER NRLLARGRLK HQYPHSWRSK KPVIFRNTPQ WFIAMDRDIA DDGKANHGDT
LRARALQAIS VTRWVPPAGQ NRITGMIANR PDWVISRQRA WGVPIAVFVR EKGDGSAEVL
IDDAVNRRIS DAFEKEGADA WYAEGARERF LGDRAGEDWS KVDDILDVWF DSGSTHAFVL
EDPAHFPSLR DIKRKADGGR DTVMYLEGSD QHRGWFHSSL LESCGTRGRA PYDIVLTHGF
TLDENGRKMS KSLGNTVDPQ KVIKDSGADI LRLWVCATDY ADDQRIGPEI LKNTIETYRK
LRNTIRWMLG TLHHFDRGEA VAFTEMPELE RLMLHRLAEQ SALVRSAYAE FDYKTVVASL
AAFMNTELSA FYFDIRKDTL YCDPPSSPAR KAALTVIDKL CDAILKWLAP VLSFTTEEAW
RLYRPDAEPS VHLTLFPESF DNFRDDSLAA KWETVRAVRS VVTGALELER AAKRIGSSLE
ASPIVHVADR AMLGTLFDID LAEVCITSNF EVREGDAPDG AFRLPNVQGV AVVVEKAAGT
KCARSWKILP TVGSDSEYPD VSPRDAQALR EWKALGVTV