Gene Nwi_2485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2485 
Symbol 
ID3676799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2707057 
End bp2708709 
Gene Length1653 bp 
Protein Length550 aa 
Translation table11 
GC content63% 
IMG OID637714051 
Productputative ABC transporter ATP-binding protein 
Protein accessionYP_319090 
Protein GI75676669 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.445071 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.555297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCC AGTTCATCTA CTTCATGCAG GGCTTGTCCA AAACCTATCC GCCGAACCGG 
AAGGTGCTGG ATAACATCCA CCTGTCGTTC TATCCGGACG CCAAGATCGG CGTGCTCGGC
GTCAACGGCT CGGGTAAATC GACGCTGCTG AAGATCATGG CCGGCCTCGA TAAGGACTAC
ACCGGCGAGG CCTGGGTCGC GGAAGGCGCC CGCGTCGGCT ATCTCGAACA AGAGCCGCAA
CTCGATCCCG CCAAGACCGT GCGCGAGAAC GTCATGGAAG GCGTCGCCAA GCACAAGGCG
ATCCTCGATC GCTACAACGA ACTGGCGATG AACTACTCCG ACGAGACAGC CGACGAGATG
ACCCGGTTGC AGGACGAGAT CGAGGCCGCC GGCCTGTGGG ATCTCGACAG CAAGGTCGAT
CAGGCGATGG ACGCGCTGCG CTGCCCCCCC GATGATGCCG ACGTAACCAA GCTCTCCGGC
GGCGAGCGCC GCCGCGTCGC GCTATGTAAA CTGCTGCTCG ACCAGCCCGA CCTCCTGCTG
CTGGACGAGC CGACCAACCA TCTCGATGCC GAGTCGGTGT CGTGGCTCGA GGGTCACCTG
CGCAATTATC CGGGTGCGAT CCTGATCGTC ACCCACGATC GCTACTTCCT CGACAACGTC
ACGGGCTGGA TTCTCGAACT CGATCGCGGC CGGGGCATTC CCTACGAGGG CAACTACTCC
TCGTGGCTGG TGCAGAAGCA GAAGCGGCTG GAGCAGGAAG GCCGCGAGGA CGCCGCGCAC
CAGAAGACGC TGGCGCGCGA GCAGGAATGG ATCGCGGCCT CGCCGAAGGC CAGACAGGCG
AAATCCAAGG CGCGTTACCA GCGTTATGAA GAACTGCTCG CCAAGGCCAG CGAGAAGCAG
ACCCAGACCG CGCAGATCAT CATCCCGGTT TCCGAGCGGC TTGGCGCCAA TGTCGTGGAC
TTCGAGGGCT TGTCGAAATC GTTCGGCGAT CGCCTGCTGA TCGATGATCT GACCTTCAAG
CTTCCGCCCG GCGGCATCGT CGGCGTCATC GGTCCCAACG GCGCCGGCAA GACCACGCTG
TTTCGTATGA TCACGGGGCA GGAGACCCCG GACAAGGGCA CGATCACGGT GGGCGAGACG
GTGCAACTGG GTTACGTGGA TCAGTCCCGT GACGCGCTCG ACGGGTCGAA GACCGTGTGG
GAGGAAATCT CCGGCGGCAC CGATCAGATC CTGCTCGGCA AGAAAGAGGT CAACTCGCGC
GCCTATTGCT CGACCTTCAA TTTCAAGGGC GCGGACCAGC AGAAGAAGGT GGGCGCGCTG
TCGGGCGGCG AGCGCAACCG CGTGCATCTT GCCAAGATGC TCAAGTCCGG CGCCAACGTG
CTGCTGCTCG ACGAGCCGAC CAACGACCTC GACGTCGACA CGCTGCGCGC GCTGGAAGAG
GCGCTGGAGG ATTTCGCCGG CTGCGCCGTG GTGATCAGCC ACGACCGCTG GTTCCTCGAT
CGCATCGCCA CGCATATCCT GGCCTTCGAA GGCGACAGCC ACGTCGAATG GTTCGAGGGC
AACTTCCAGG ACTACGAGAA GGACAAGATG CGCCGGCTTG GTCAGGACAG CGTCATCCCG
CACCGGGTGA AGTACAAGAA GTTGACGAGG TGA
 
Protein sequence
MARQFIYFMQ GLSKTYPPNR KVLDNIHLSF YPDAKIGVLG VNGSGKSTLL KIMAGLDKDY 
TGEAWVAEGA RVGYLEQEPQ LDPAKTVREN VMEGVAKHKA ILDRYNELAM NYSDETADEM
TRLQDEIEAA GLWDLDSKVD QAMDALRCPP DDADVTKLSG GERRRVALCK LLLDQPDLLL
LDEPTNHLDA ESVSWLEGHL RNYPGAILIV THDRYFLDNV TGWILELDRG RGIPYEGNYS
SWLVQKQKRL EQEGREDAAH QKTLAREQEW IAASPKARQA KSKARYQRYE ELLAKASEKQ
TQTAQIIIPV SERLGANVVD FEGLSKSFGD RLLIDDLTFK LPPGGIVGVI GPNGAGKTTL
FRMITGQETP DKGTITVGET VQLGYVDQSR DALDGSKTVW EEISGGTDQI LLGKKEVNSR
AYCSTFNFKG ADQQKKVGAL SGGERNRVHL AKMLKSGANV LLLDEPTNDL DVDTLRALEE
ALEDFAGCAV VISHDRWFLD RIATHILAFE GDSHVEWFEG NFQDYEKDKM RRLGQDSVIP
HRVKYKKLTR