Gene Nwi_2472 details

Gene Information

• Locus tag: Nwi_2472
• ID: 3674689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter winogradskyi Nb-255
• Kingdom: Bacteria
• Replicon accession: NC_007406
• Strand: +
• Start bp: 2696673
• End bp: 2697224
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637714038
• Product: triple helix repeat-containing collagen
• Protein accession: YP_319077
• Protein GI: 75676656

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGGCAGGCG AAAAGCGCGG CAAGCAGGGA CCGCAGGGCA TCCCCGGCAT TCAGGGACCG 
CCGGGACGCA CCGGTTCGCA AGGCAAACCG GGGCCGCGCG GCGCACCGGG AAAACCCGGC 
GCTCAGGGTG CAGCAGGAAA AGCGGGGTCG CAAGGCAAGC CCGGTCCCGA CGGCAAACCG 
GGGCGCGACG GAAAGCCGGG AGCGGACGGC AAACAAGGCC CTCGCGGCGA ACAAGGTCCA 
CGAGGTGAAC AAGGTTCGCC AGGTCCGCGC GGAGAACAGG GGCCACAGGG TCCACGCGGC 
GAACAGGGCC CGCCGGGGCG CCTGCCGTCG ATCGAGGAGG TTCTACCCTG GATCGAAAAG 
ATCATCGAAG CCTGGGGTGA GCATCAGCGC CGGCAAACGA TCGAGGCCGA GAATCGGTTG 
CTCGCCGAAC AGCAGCGTAT CGAAGCCGAG CGCTCGCTCG TCCAGACGCT GCAGGATAAT 
GACGTAACCA ACGGCGGGCG GGAAAAAAGA AAAAAACAAA AACGTCGCCT GAAGGGCGGC 
GGCGGCGAAT AG 

 

Protein sequence

MAGEKRGKQG PQGIPGIQGP PGRTGSQGKP GPRGAPGKPG AQGAAGKAGS QGKPGPDGKP 
GRDGKPGADG KQGPRGEQGP RGEQGSPGPR GEQGPQGPRG EQGPPGRLPS IEEVLPWIEK 
IIEAWGEHQR RQTIEAENRL LAEQQRIEAE RSLVQTLQDN DVTNGGREKR KKQKRRLKGG 
GGE