Gene Nwi_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2398 
Symbol 
ID3675951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2618500 
End bp2619729 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content63% 
IMG OID637713962 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_319004 
Protein GI75676583 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase
[TIGR03568] UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.496408 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGTCA ACGTCACCAT GACGGCCTCG CGTCGCCGCA TCGCGGTCGT GACCGGATCC 
CGCGCCGACT ATGGCCTGCT CCGCGGGCTG TTGACCAGAT TGCGTGGATG CGCCGGGATC
GACCTCCAGG TGGTCGCTTG CGGCATGCAT CTAGCCCCGC GTTTCGGCGA GACATGGCGC
GCGATCGAAG CCGACGGCTT CACTTTGACC GGGAAAGTCG ATCTCGAACT CGGCGACGAC
ACGCCGGACG CAATCGCGCG CAGCACGGGA ATCGGGACTA TCGGCTTTTC AGAAGCTTTC
CAAAGGCTTT CTCCCGATCT GGTCGTCGTG CTTGGTGACC GCTTTGAGAT CCTGTCCGCC
GCCACAGCGG CAACGCTGTC CAACATTCCA ATTGCCCACA TCCATGGCGG CGAAATTACC
GCCGGCGCTT TCGATGACGC CATCCGCCAT GCGGTGACGA AAATGGCGTG CATCCATTTC
GTCGCGGCGG AACCCTATCG TCTGCGCGTC ATTCAGATGG GCGAGAACCC AGACTTCATA
TTCAACGTCG GCGCGCCCGG ACTTGATCAA GCGGACGTCG CGCCTGCTCT CGACCGTTCT
TCGCTGTTCG AATCACTCGG CATCGGCGAA CCTCGCCGGT TCCTGCTGGC GACGCTTCAT
CCAACGACGG CACGCCCGGG GGCCGATCGC GCCACCGCCG CTGCTCTTCT CGGTGCCCTG
GCGCAGGTCA AGGATCGCGG CATCATCTTT ACCGGCGTCA ATGCCGACCC GGGAAACAGG
ATCATTGACA ATGCCGTGCG CGACTTCGTC AGCGCGCGGC CGGGGCACGC ATACCTGTTC
ACCTCACTCG GCAGCGATCG CTACTGGTCG GCCCTCAGGC TCACCGACGT GGTGATCGGA
AACTCATCGA GCGGAATCCT GGAGGCGCCC GCCGTTGGAA CCCCGTCGAT CAACATCGGG
GACCGGCAGT CGGGACGATT GCGCGCGGCG TCGATCCTGG ATTGCGCCGT CGATCAGGCC
GAAATTTCGG CAGCGCTCAG TCTGGTCCTG GAAGGCCGCT TCCAGCCTGA TCTGTCACTG
GAGCCGCCCT ATGGCCGCGG TGGCGCCTCC GGCCGGATCG CCGACCTCAT CCAGTCGATC
GATCTGACCA AGGCTTTTCC AAAAACTTTC CATGACCTGC CGCCCACGAC CATTTCGCAG
CATTCGGCAT CCGCCCCTGC CGTCCCGTAG
 
Protein sequence
MAVNVTMTAS RRRIAVVTGS RADYGLLRGL LTRLRGCAGI DLQVVACGMH LAPRFGETWR 
AIEADGFTLT GKVDLELGDD TPDAIARSTG IGTIGFSEAF QRLSPDLVVV LGDRFEILSA
ATAATLSNIP IAHIHGGEIT AGAFDDAIRH AVTKMACIHF VAAEPYRLRV IQMGENPDFI
FNVGAPGLDQ ADVAPALDRS SLFESLGIGE PRRFLLATLH PTTARPGADR ATAAALLGAL
AQVKDRGIIF TGVNADPGNR IIDNAVRDFV SARPGHAYLF TSLGSDRYWS ALRLTDVVIG
NSSSGILEAP AVGTPSINIG DRQSGRLRAA SILDCAVDQA EISAALSLVL EGRFQPDLSL
EPPYGRGGAS GRIADLIQSI DLTKAFPKTF HDLPPTTISQ HSASAPAVP