Gene Nwi_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2362 
Symbol 
ID3677314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2583037 
End bp2583798 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content56% 
IMG OID637713926 
ProductABC transporter, inner membrane subunit 
Protein accessionYP_318968 
Protein GI75676547 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0916375 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTTCG GAGCCGTGCA GGCGATTTAC AAGTTCGAGA TGGCGCGCAC CTGGCGCACG 
CTGCTGCAAA GCATCGTGTC GCCGGTGGTT TCGACCTCGC TCTATTTCGT GGTGTTCGGC
GCGGCGATCG GATCGCGCAT CACCGAGGTC GAGGGCGTCA GTTACGGCAC CTTCATCGTA
CCGGGGCTCA TCATGCTATC CGTGCTGACG CAAAGCATCA CCAATGCTTC GTTCGGCATC
TACTTCCCGA AGTTCATCGG CACCATCTAC GAGATACTGT CGGCGCCGGT TTCCTATTTC
GAGATCATTA TGGGCTATGT GGGAGCCGCC GCCACCAAAT CGATCATTCT GGGCCTGATC
ATTCTGGCGA CCGCCGGCCT GTTCGTTCCG CTGCACATCC ATCACCCGAT CTGGATGCTG
ACCTTTCTGG TCCTGACCTC CGTCACATTC AGCCTGTTCG GCTTCATCAT CGGCATCTGG
GCCGACGGCT TCGAGAAGCT GCAAATGATT CCGATGCTGA TCATCACGCC GTTGACGTTC
CTCGGAGGCA GTTTTTATTC GATCAACATG CTGCCGCCGG CATGGCAAAC CGCCGCGCTG
TTCAATCCCG TCGTCTATCT CATCAGCGGA TTCAGGTGGA GTTTTTACGA GATCGCCGAC
GTCAGCCTGT CGGTCAGTAT CGGCATGACG GTCGGTTTCC TCGTCGTCTG CATGTTGGTC
GTATGGTGGA TATTCCGAAC CGGCTATCGG CTGAGAAATT AA
 
Protein sequence
MNFGAVQAIY KFEMARTWRT LLQSIVSPVV STSLYFVVFG AAIGSRITEV EGVSYGTFIV 
PGLIMLSVLT QSITNASFGI YFPKFIGTIY EILSAPVSYF EIIMGYVGAA ATKSIILGLI
ILATAGLFVP LHIHHPIWML TFLVLTSVTF SLFGFIIGIW ADGFEKLQMI PMLIITPLTF
LGGSFYSINM LPPAWQTAAL FNPVVYLISG FRWSFYEIAD VSLSVSIGMT VGFLVVCMLV
VWWIFRTGYR LRN