Gene Nwi_2344 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2344 
Symbol 
ID3674490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2564960 
End bp2565904 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content67% 
IMG OID637713908 
ProducttRNA isopentenyltransferase 
Protein accessionYP_318950 
Protein GI75676529 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGGGT TGAACCGTGA TGAGGGGGTG GAGGCGACGG ATGCCGTGCT TATCGCAGGG 
CCGACCGCGA GCGGCAAGTC CGCGCTGGCG CTGTCGCTTG CCGAACAGAC TGGCGGCGTC
GTCATCAATA CCGACTCCAT GCAGGTCTAT CGAAATCTCC GCATTCTCAC CGCGCGGCCG
ACGCCTGATG AGGAGGCGCG CGCGCCGCAC CGGCTTTACG GCCACGTTGA TGCGAGCGTG
AACTACTCCG CCGGAAGGTG GGTGGCCGAT GCGACGGCGG TTCTCAACGA AACACTCGCA
AAAAAGCGGC TGCCGATCTT CGTTGGCGGC TCCGGTCTCT ACTTCAAGGC GCTGACGCGC
GGCCTGTCGG CGGTGCCGCC GATTCCGCCA GAGGTGCGCA ACGACGTCCG CGCTCGTCTC
GAACGCGACG GGGCCGAGGC GCTCCATGCG GTTCTTGCCC GGTGCGATTC TGAGACGGCG
CAACGCCTGA GACCGCGCGA TCGCTCCCGC GTCGCCCGCG CGCTTGAAGT CGTCGAGGCG
ACCGGACGCT CGCTGACCGA TTGGCATCGC GACGGCTTGC CGCCTTTGCT GCCGGCGGAG
CGGGTGAGGG CGGTGTTCCT TGCTCCGGAG CGTGACGCGC TTTACGCGCG GATCGACGCG
CGTTTCGGCG CGATGCTGGC GGCCGAGGCG CTGGAAGAGG TCGCTGCGCT GGCCGAACGG
CGCCTTGATC CGCTTCTGCC GGCGATGAAG GCGCATGGCG TACCGGCGCT GATTCGGCAT
CTGCGCGGCG AGATATCCCT GGAGCGGGCG GCCGAGATCG GCCGCGCCGA CACGCGCCAT
TACGCCAAAC GGCAATTCAC CTGGTTTCGT CATCAGTTGC CGGAGTTCAT CTGGGCCGCT
CCGGCGGAGG CAAGACAAGT GCTGGAGAGG GCCGAAGCGC GATAA
 
Protein sequence
MGGLNRDEGV EATDAVLIAG PTASGKSALA LSLAEQTGGV VINTDSMQVY RNLRILTARP 
TPDEEARAPH RLYGHVDASV NYSAGRWVAD ATAVLNETLA KKRLPIFVGG SGLYFKALTR
GLSAVPPIPP EVRNDVRARL ERDGAEALHA VLARCDSETA QRLRPRDRSR VARALEVVEA
TGRSLTDWHR DGLPPLLPAE RVRAVFLAPE RDALYARIDA RFGAMLAAEA LEEVAALAER
RLDPLLPAMK AHGVPALIRH LRGEISLERA AEIGRADTRH YAKRQFTWFR HQLPEFIWAA
PAEARQVLER AEAR