| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2340 |
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| Symbol | |
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| ID | 3674486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | + |
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| Start bp | 2559103 |
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| End bp | 2560674 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637713904 |
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| Product | substrate-binding region and inner membrane component of ABC-type glycine betaine transport system |
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| Protein accession | YP_318946 |
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| Protein GI | 75676525 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.837493 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC TGTTCGATCC GCGCTGGAGC GAAGCACTCG CTCACCTGCC GGACTATCTC
GGCAACCACG TCCGCGTCAG CCTAACGGCG CTGGCGCTGG GCCTCGCGAT CAGCTTCCCG
CTGGCGCTGA CCGCCCGCAA CCGGCCGATG CTGCGCAGCG CGCTTCTCGG TTTTGCAAGC
ATCGTACAAA CCATGCCGGG GCTGGCGCTG CTGGCGTTGT TCTATCCGCT CCTCCTGGCG
CTGGCGATTA TGACATCGCA ATGGTTCGGC TTCGGCTTCT CCGCGTTCGG ATTCCTGCCT
TCGGTGCTGG CGCTGGCGCT CTATTCGATG CTTCCGGTGC TGCGCAACAC CATCACCGGC
CTTCAGGGGA TCGATCCCGC ATTGACGGAA GCGGCTAGAG GGGTCGGCAT GACGGCGCGG
CAATCCCTCA CCATGGTCGA GCTTCCGCTG GCGCTGCCGG TCATCATGGC GGGCATCCGC
ACCGCGGCGG TCTGGGTGAT CGGCACCGCG ACGCTCTCCA CGCCCATCGG CCAGACCAGT
CTCGGCAACT ACATCTTCGC CGGGCTGCAA ACCCTGAACT GGGTGTTCGT GCTGTTCGGC
TGCATCGCCG CGGCGGCCCT CGCGCTGGTC GTGGATCAGT TGCTGGCGCT GATCGAATCC
GGCTTGCGGA TGCGCAGGCG CATCCGCGTG TCAACCGGTA TTGTCGGCAT CGCAATCCTG
GTTGCGGCGA CATTGGCGCC CTCTCTGACC CGCGCGACAT CCACCACGAT CGTCGGCGCC
AAAACCTTCA CCGAACAATA TGTGCTCGCG GCGCTGATCT CGCACCGGCT GCAAGCCGCG
GGTCTTCCGG CGACGACCCG CGAGGGGCTC GGCTCCAACG TCATTTTCGA CGCGCTGGCG
AACGGCGACA TCGATGTCTA CGTCGATTAT TCCGGTACGC TGTGGGCCAA TCAGTTCCAT
AGGACAGACC TGAGGCCGCG CGAGGAATTA CTCACCGAGC TTGAGACGAT ACTGGCGCGG
CGGAATATTA CGCTGCTTGG CGAACTCGGT TTTGAGAATG CCTACGCGCT GCTCATGCCA
AAAGCGCGGG CCGACGCGCT GGGCATTCAT ACGATCTCCG ATCTCGCCGC CCATGCCGGC
AACATGTCGA TCGCCGGCGA CTACGAATTC TTCGCCCGGC CTGAATGGAC GGCTCTGAAG
AAGGCTTACG GATTATCGTT TCGCGAGCGG CGACAGATGC AGTCGGATTT CATGTATGCC
GCCGTGGCGT CCGGTGAAGT CGACGTGATC GCGGGCTACA CCAGCGACGG CCTGATCGCG
AAATACGGCC TGACCGTGCT TGACGACACC AGACACGCAA TTCCACCCTA TGACGCGATT
GTTCTGCTGG CGCCGCGGCG CGCCAATGAC GCCAAGCTGC GCGCCGCGCT TCAGCCCCTG
CTTGGCAGGA TCGACATCGC CATCATGCGG GAGGCCAACT TCCGCGCCAG CGACAGTGAT
ACGGACAACT CACCGGCAAC CGTGGCGCGG TGGTTGTGGA CGAAGATCAA TGAGAAGAAG
ATCAATGAGT AA
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| Protein sequence | MSLLFDPRWS EALAHLPDYL GNHVRVSLTA LALGLAISFP LALTARNRPM LRSALLGFAS
IVQTMPGLAL LALFYPLLLA LAIMTSQWFG FGFSAFGFLP SVLALALYSM LPVLRNTITG
LQGIDPALTE AARGVGMTAR QSLTMVELPL ALPVIMAGIR TAAVWVIGTA TLSTPIGQTS
LGNYIFAGLQ TLNWVFVLFG CIAAAALALV VDQLLALIES GLRMRRRIRV STGIVGIAIL
VAATLAPSLT RATSTTIVGA KTFTEQYVLA ALISHRLQAA GLPATTREGL GSNVIFDALA
NGDIDVYVDY SGTLWANQFH RTDLRPREEL LTELETILAR RNITLLGELG FENAYALLMP
KARADALGIH TISDLAAHAG NMSIAGDYEF FARPEWTALK KAYGLSFRER RQMQSDFMYA
AVASGEVDVI AGYTSDGLIA KYGLTVLDDT RHAIPPYDAI VLLAPRRAND AKLRAALQPL
LGRIDIAIMR EANFRASDSD TDNSPATVAR WLWTKINEKK INE
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