Gene Nwi_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2339 
Symbol 
ID3674485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2558315 
End bp2559106 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID637713903 
ProductABC transporter, ATPase subunit 
Protein accessionYP_318945 
Protein GI75676524 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.749366 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGAAA CCTCACCGCT GATCGCGTTT TCACATGTCG TCAAAAGCTT TAACGGCAGC 
CATGTGAGAG CCGTTAACGA CGTCTCGTTC GACATCGCGG CGGGTGAATT CCTCGCCGTC
GTCGGTGGTT CCGGCTCCGG CAAGACCACG CTGCTGCGGC TCGCCAATCG CCTGATCGAT
CCCGATGCCG GTACGATCAC CGTTGCGGGA GAGGATATCG CCGGAATCGA CGCGATCGGG
CTGCGCCGCC GGATCGGCTA TGTATTCCAG AGCGGCGGCC TGTTTCCTCA TATGAGCATC
GCGGCCAATA TCGGCATCAC GCCCCGCCTG CTCGGGACGC CGAAATCCGA AATCGCGGCG
AGGGTCGACG AACTGCTCGA TCTGGTGCAA CTCGACCGCG CGCAGTACCG CGACCGCCTC
CCGCATGAGC TTTCCGGCGG CCAGCGCCAG CGCGTCGGCG TCGCGCGCGC ACTCGCCGCG
AAGCCGCGCA TCGTTCTGAT GGACGAGCCC TTCGGCGCCC TTGACCCGGT AACGCGTGAC
GCGCTCGGCA ACGACTATCG CGCGCTGCAC ATCGGGCTCG GCCTCACCAC CATCATGATC
ACCCATGACA TGACCGAAGC GCTGCTGCTC GCGGATCGCG TCGCGGTCAT GCACGAAGGC
CGCCTGGTTG CGCTGGGGAC GGCGAAAGAA CTGTCCCGTA TCGACAGCCC CTATGTCGGC
GAACTGCTCG GCACGCCACG CCGCCAGGCC GAGCGACTTC AGGCCGCGCT CTCGCAGAAC
ATCGCGTCAT GA
 
Protein sequence
MGETSPLIAF SHVVKSFNGS HVRAVNDVSF DIAAGEFLAV VGGSGSGKTT LLRLANRLID 
PDAGTITVAG EDIAGIDAIG LRRRIGYVFQ SGGLFPHMSI AANIGITPRL LGTPKSEIAA
RVDELLDLVQ LDRAQYRDRL PHELSGGQRQ RVGVARALAA KPRIVLMDEP FGALDPVTRD
ALGNDYRALH IGLGLTTIMI THDMTEALLL ADRVAVMHEG RLVALGTAKE LSRIDSPYVG
ELLGTPRRQA ERLQAALSQN IAS