Gene Nwi_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2305 
Symbol 
ID3675929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2522735 
End bp2523697 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content68% 
IMG OID637713868 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_318911 
Protein GI75676490 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02797] tonB-system energizer ExbB 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.605743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.719184 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGTC ATTCAGGAAT GACATTATCG AGAAAGCGCC ATGCGCGGGT TGCGCGCGCT 
GCGATTGCCG GCGTTGCCCT GCTCATCGGC GCCTTCGGCC CGCTTCACGC ACAAGGACTC
CCGCAAGCCA CACCGGCCAT CACCGCTCCC CATTCGCCCT CCGGGCCGCC CGCATCGGAG
ATATCGTCCA CCACCGACCA CCTCAACGCG ACCTCATCGT CGCCCGCACC TGCGTCCGCT
CCGAGCGCCA TCATCGCCAA CGACTCCGCT TCGCCTCACG AGTTATCTCC GTGGTCGATG
TTCATGTCGG CGGATATTGT CGTTCAGCTG GTGATGATCG GTCTTGCGTT TGCGTCGCTG
GTGACGTGGA CGATCTGCAT CGCGAAGCTG GCGGAGCTGT CGCTGGCGCG GCGCGCGCTG
CGGGCGGCGC TGAACAAGAT CGGCGACGCG CGCTCGCTGG CGGAAGCGCA GATGGCGCTC
GGCGCGCGGG AGGGCGTGCT GGCCTCGCTG CTGGCCTCGG CGATGCACGA GGCGCGGCTT
TCGGCCGGCA TTTCCAGCGA CGCCGGCATC AAGGAGCGCG CGGCGTCGAG CTTCGCCGAG
ATCGTCCGCG CGGAATCGCG CCGCATCCGG CTCGGCATGG GGCTGCTCGC CACCATCGGC
GCGACGTCGC CGTTCGTCGG CCTGTTCGGC ACCGTGTGGG GCATCATGAA CAGCTTCATC
GGGATTTCGA AGTCGCAGAC CACCAACCTC GCGGTGGTGG CGCCCGGCAT CGCCGAGGCG
CTGCTCGCGA CCGCGCTCGG CCTTGTCGCC GCCATTCCGG CGGTCATCAT CTACAACTAC
TTCGCGCGCG TGACGCGGGG CTACACCGAA CTGGTCGGGC GCGCCTCGGG AGCGGCCGGC
CGGCTGCTGT CGCGCGATCT GGACCGCACC CACGGCTCTC TTACCTCGCG CGCGGCGGAG
TAG
 
Protein sequence
MMRHSGMTLS RKRHARVARA AIAGVALLIG AFGPLHAQGL PQATPAITAP HSPSGPPASE 
ISSTTDHLNA TSSSPAPASA PSAIIANDSA SPHELSPWSM FMSADIVVQL VMIGLAFASL
VTWTICIAKL AELSLARRAL RAALNKIGDA RSLAEAQMAL GAREGVLASL LASAMHEARL
SAGISSDAGI KERAASSFAE IVRAESRRIR LGMGLLATIG ATSPFVGLFG TVWGIMNSFI
GISKSQTTNL AVVAPGIAEA LLATALGLVA AIPAVIIYNY FARVTRGYTE LVGRASGAAG
RLLSRDLDRT HGSLTSRAAE