Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2284 |
Symbol | |
ID | 3675732 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2496543 |
End bp | 2497754 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637713847 |
Product | secretion protein HlyD |
Protein accession | YP_318890 |
Protein GI | 75676469 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.831641 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.154042 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTAA GAAGGGAAGG CGATACCGGC GACATGACAG AGGTGCCGCC GCGCGAACTG AACGAAAAGC CTCGCACGCG CCCGGTGCGC ATGACGCGCT GGTTTATCAT CGGGGGAATA TTGCTCTCGT TGCTGGTCGG CGGGCTGGTA GGGTTCAATG CCTTCCGCGC GCACATGATC GCGCAGTTCT TTGCCAACAA TAAGCCGCCG CCGGTGACGA TCAGCGCGGT CGAGGTCAAA TCTGAAGTCC TGCCCAATCT GCAGCGGGCG GTCGGCAGCC TGGCCGCGGT GCATCAGGTC AACGTTTCAT CGGATGTTAA CGGCCGCATT ACCGAGATTT TATTCACCGC CGGCAGCCGT GTCGTTAAGG GCGCGCCGCT GGTTCAACTG TTCGACAAGC CGGAACAAGG CGACCTGGCC AGCTTCAAGG CTCAGGCGAC GGTCTCACGC CTTGCTCTGG AGCGGGCGAA GCAGCTCGCC GCGCGTCAGG TCGGTCCGCA GGTGACGGTG GATCAGGCGC AGGCCGCTTT CGACCAGGCC AATGCGGGCA TCGCCAAGAC CGAGGCGATC ATTTCGCAGA AGCTGGTGCG CGCGCCGTTC GACGGCGTGC TCGGCGTCCG TCAGGTGGAA GTGGGGCAGT TTCTGAACGC CGGAACGCCG ATCGTGTCGC TGACCGATCT GTCGACCCTG TTCGCGAACT TCACGGTGAC TGAAAAGGAC AGCGCACGGC TTGCGGTCGG CCAGACGGTG CGGGTGTCGG TCGATGCCTA TCCGGGCAGG GAGTTTGACG GCAAGATCAC CACCATCGAG CCGCAGATCG CCACTGAAAC CCGCAATATC CGAGTCCAGG CCACCATCGC CAACCCGGAC AACATCCTTA AGCCCGGCAT GTTCGCCGAT GTGATCGTGG TGCTGCCGGA CAAGCCGCCG GCTGTCACGG TCCCGGAAAC CGCGGTCGAT TACACGCTGT ATGGCGACTC CGTCTATCTC ATCAAGGAGA AGAAGGAGGA CGACGGCAAG ACCAGCTTGA CGGTCGAGCG CACCTTTGTC CGCACCGGCG ACCGGATCAA TGGCCGCGCG ATCATCGAGA AAGGGGTCAA GCCCGGCGAC AGGGTCGCCG CGGTCGGCCA GCTCAAGCTG CAGTCGGGCG CCGCGGTCGA GATTTCGAAA GATCAGATGC CGCAGATTCC GGCGGAGCCG CCGCTGAACT GA
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Protein sequence | MTVRREGDTG DMTEVPPREL NEKPRTRPVR MTRWFIIGGI LLSLLVGGLV GFNAFRAHMI AQFFANNKPP PVTISAVEVK SEVLPNLQRA VGSLAAVHQV NVSSDVNGRI TEILFTAGSR VVKGAPLVQL FDKPEQGDLA SFKAQATVSR LALERAKQLA ARQVGPQVTV DQAQAAFDQA NAGIAKTEAI ISQKLVRAPF DGVLGVRQVE VGQFLNAGTP IVSLTDLSTL FANFTVTEKD SARLAVGQTV RVSVDAYPGR EFDGKITTIE PQIATETRNI RVQATIANPD NILKPGMFAD VIVVLPDKPP AVTVPETAVD YTLYGDSVYL IKEKKEDDGK TSLTVERTFV RTGDRINGRA IIEKGVKPGD RVAAVGQLKL QSGAAVEISK DQMPQIPAEP PLN
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