Gene Nwi_2283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2283 
Symbol 
ID3675731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2493245 
End bp2496340 
Gene Length3096 bp 
Protein Length1031 aa 
Translation table11 
GC content62% 
IMG OID637713846 
Productacriflavin resistance protein 
Protein accessionYP_318889 
Protein GI75676468 
COG category[V] Defense mechanisms 
COG ID[COG0841] Cation/multidrug efflux pump 
TIGRFAM ID[TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.212799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTCA CGGACATCTT CATCAAGCGG CCGGTGTTGT CGATCGTCGT CAGCCTGCTG 
ATCCTGCTGA TCGGCCTGGC GGCGGCGTTC AACTTGCCGG TCCGGCAGTA TCCGAAGCTG
TCCAACACCG TGATCACCGT CACCACGATC TATCCGGGCG CGTCGCCGGA TCTGATGCAG
GGCTTTATCA CCACGCCGAT CGAGCAGGCG GTCGCGTCGG CCGAAGGCGT TGACTACATC
ACTTCCACCT CGACACAGGG CCAGAGCCAG ATCAAGGTCT ACGTCAAGCT GAATTTCGAT
CCGAACGCGG CGCTCACCGA GGTTCTGTCG AAGGTCAATT CGGTGAGATA TCTGATCCCG
AAGGAAGCCA ACGACCCGGT GATCCTGAAG TCCACCGGCG AGACCACGGC GGTGATGTAT
ATCGGCTTCT CGAGCGATGA ACTGTCGGGC TCGGCGATTT CCGATTACCT GACGCGCGTG
GTGCAGCCCA TCCTCTCGAC CGTGGACGGC GTGGCTTCGG CCGACATTCT CGGCGGTCAG
ACCTTCGCGA TGCGGGTGTG GCTTGATCCG ATGAAGATGG CCGGACGCAA CGTGACCACC
GCCGAAATCG CCATCGCGAT CGCCGCCAAT AATTTCCAGG CGGCGGCGGG CCAGACCAAG
GGCTACTACA CGATCTCCAA CGTGACCACC AATACCGACC TGCAAAGCGT CGAGCAGTTT
AAGCGCATGA CCGTGAAGGC CAAGGACGGC GGCTTCGTGC GCATGGAAGA CATCGCCACG
GTGGAGCTGG CGGCGCAAAG CACGAACGCC AGCGTCGCTT TCAGCGGGCA GCGCGCGATC
TTCATCGGCG TGCAGGCGAC CCCGCAGGGC AACCCGCTGA ACATCGTCGC CGGAGTGCGG
GCGCTGTTTC CGGACATCGA GCGGAATCTT CCTCCCTCGA TGAAGATGAA GGTGGCTTAC
GACTCGACCA AGTTCATTAC CTCCTCGATC CATGAGGTGC AGAATACGCT GATCGAGGCG
GTCCTCATCG TTATCGTCGT GATCTTCCTG TTTCTCGCCT CGCTGCGTTC GGTCATCATC
CCGGTGGTCA CGATTCCGCT GTCGCTGATC GGCGTTTGCG CGCTGATGCT GGCCGCGGGG
TTCAGCTTCA ACCTGCTGAC GCTGCTGGCG ATGGTGCTGG CGATCGGCCT TGTGGTCGAT
GACGCCATCG TGGTGGTGGA GAACATCCAC CGGCATCTCG AAGAGGGTAA GTCGGCGGTT
CAGGCGTCCT TGCAGGGCGC GCGCGAAATC GTCGGCCCGG TCATCTCGAT GACGATCACG
CTGGCCGCGG TGTATGCGCC GATCGGCTTC CTGGGCGGTC TCACCGGCGC GCTGTTTCGC
GAATTCGCTT TCACGCTGGC CGGGGCGGTG ATCGTCTCCG GCGTCATCGC GCTGACACTG
TCGCCGATGA TGTGCTCCGT GCTGCTCAAG CACGGCGGGC AGGGCTGGTT CGCCACGAAG
GTCGACAGGA TCTTCAGTTC GGTGACCGAT TGGTATGGCC GGAAGCTGGA TCGCTCGCTC
GACTACCGGC CGGTGACGGC GCTGTTCGCG GTGACGCTCC TCGGGCTGGT CGGCTTTCTT
TACATGAACA CCTCAACGGA GTTGGCGCCC GAAGAGGATC AGGGCATCGT GTTCGCGGTC
ATCAAGGCGC CGAAATACGC CAACCTCGAC TACATGGATT TTTACGGTAA CAAGCTCGAC
AAGGCATATG CGAGTTTCCC CGAGACCGAC CTGCGCTTTG TGATCAACGG CACCAACGGC
ATCAACGATG GTATCGCCGG CATGTTGTTG AAACCGTGGG ACGAGCGCAC GCGCTCCGCG
ATGACCATCA AGCCGCTGGT GCAAGCTGAA ATCAGCAAGG TAGAGGGCGT GAGCGCTTTC
GCCTTCAACC GGCCGCCGCT GCCGGGCGGT CCGGGCGGTC TGCCGGTGCA GATGGTGCTC
TACAGCACAT CCAGCTTCCA GACGGTCTAT GAGGAAATGA ACAAGCTCAA GGAGGCGGCG
CGGAAGAGCG GTCTGTTCAT CGTCTCCGAC AGCGACCTCG ACTATAACCA GCCGGTGGTT
CGCGTCGCTA TCGATCGGAC CAAGGCGAAC GATCTCGGCG TCACCATGCA GCAACTCGGC
GGGACGCTGG CGACGCTGCT CGGCGGCAAC TACGTGAACC GGTTCAACCT TCAGGGGCGC
TCTTATCAGG TGATCCCGCA GGTGCCACGC GGCGAGCGCC TGTCGCCGCA ATCCCTCGAC
GGGTATTACG TGCCGGGGGC CGGCGGCCAG CAGATTCCGC TGTCCACGCT GGTCTCGATC
AAGACTGAAA CCGATCCCAA TGCGCTGACC CACTACAACC AGCTCAATGC GGCGACCTTC
CAGGCCGTGC CGATGCCGGG CGTGACGGTG GGCAAGGCCG TGGAATTCCT GGAACAGCAG
GCGAAAAATC TGCCGAAGGG TTTCAGTCAC GATTATCTCG CAGACGCCCG ACAATACGTC
ACGGAAGGCA ATCAGCTCGC GATTGCCTTC GGCTTCGCGC TCATCATCAT CTTCCTGGTG
CTGGCGGCGC AGTTCGAAAG CCTGCGTGAC CCGCTCGTCA TCATGATCAG CGTGCCGATG
GCGATTCTCG GCGCGCTGAT CCCGCTGTTC TTCGGCGTCG CGACGATCAA CATCTATACC
CAGGTGGGCC TGCTGACGCT GATCGGCCTT ATCAGCAAGC ACGGCATCCT GATGGTCGAA
TTCGCCAACG AGCTTCAGAT CAACGAGAAG CTCGACAAGC GGGCGGCGAT CGAGAAAGCG
GCGCGGGTCA GGCTGCGTCC AATCCTGATG ACGACCGCGG CGATGGTTAC AGGTCTGCTG
CCGCTGCTGA CGGCGTCGGG AGCGGGCGCG GCGAGCCGGT TCTCGATCGG CCTCGTGGTC
GTGGCCGGCA TGATGATCGG AACGCTGTTC ACTCTGTTCG TGCTTCCGGC TGTCTATGTT
GCGATCGCGA CCGATCACCT TAGCGGCACC AAGTCTGAAC GTCGCAGGCA GATCGCCGAA
TTCGACATGG AGTCGAAAGC GCTGCGACCG ACATAA
 
Protein sequence
MAFTDIFIKR PVLSIVVSLL ILLIGLAAAF NLPVRQYPKL SNTVITVTTI YPGASPDLMQ 
GFITTPIEQA VASAEGVDYI TSTSTQGQSQ IKVYVKLNFD PNAALTEVLS KVNSVRYLIP
KEANDPVILK STGETTAVMY IGFSSDELSG SAISDYLTRV VQPILSTVDG VASADILGGQ
TFAMRVWLDP MKMAGRNVTT AEIAIAIAAN NFQAAAGQTK GYYTISNVTT NTDLQSVEQF
KRMTVKAKDG GFVRMEDIAT VELAAQSTNA SVAFSGQRAI FIGVQATPQG NPLNIVAGVR
ALFPDIERNL PPSMKMKVAY DSTKFITSSI HEVQNTLIEA VLIVIVVIFL FLASLRSVII
PVVTIPLSLI GVCALMLAAG FSFNLLTLLA MVLAIGLVVD DAIVVVENIH RHLEEGKSAV
QASLQGAREI VGPVISMTIT LAAVYAPIGF LGGLTGALFR EFAFTLAGAV IVSGVIALTL
SPMMCSVLLK HGGQGWFATK VDRIFSSVTD WYGRKLDRSL DYRPVTALFA VTLLGLVGFL
YMNTSTELAP EEDQGIVFAV IKAPKYANLD YMDFYGNKLD KAYASFPETD LRFVINGTNG
INDGIAGMLL KPWDERTRSA MTIKPLVQAE ISKVEGVSAF AFNRPPLPGG PGGLPVQMVL
YSTSSFQTVY EEMNKLKEAA RKSGLFIVSD SDLDYNQPVV RVAIDRTKAN DLGVTMQQLG
GTLATLLGGN YVNRFNLQGR SYQVIPQVPR GERLSPQSLD GYYVPGAGGQ QIPLSTLVSI
KTETDPNALT HYNQLNAATF QAVPMPGVTV GKAVEFLEQQ AKNLPKGFSH DYLADARQYV
TEGNQLAIAF GFALIIIFLV LAAQFESLRD PLVIMISVPM AILGALIPLF FGVATINIYT
QVGLLTLIGL ISKHGILMVE FANELQINEK LDKRAAIEKA ARVRLRPILM TTAAMVTGLL
PLLTASGAGA ASRFSIGLVV VAGMMIGTLF TLFVLPAVYV AIATDHLSGT KSERRRQIAE
FDMESKALRP T