Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2283 |
Symbol | |
ID | 3675731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2493245 |
End bp | 2496340 |
Gene Length | 3096 bp |
Protein Length | 1031 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637713846 |
Product | acriflavin resistance protein |
Protein accession | YP_318889 |
Protein GI | 75676468 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.212799 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCATTCA CGGACATCTT CATCAAGCGG CCGGTGTTGT CGATCGTCGT CAGCCTGCTG ATCCTGCTGA TCGGCCTGGC GGCGGCGTTC AACTTGCCGG TCCGGCAGTA TCCGAAGCTG TCCAACACCG TGATCACCGT CACCACGATC TATCCGGGCG CGTCGCCGGA TCTGATGCAG GGCTTTATCA CCACGCCGAT CGAGCAGGCG GTCGCGTCGG CCGAAGGCGT TGACTACATC ACTTCCACCT CGACACAGGG CCAGAGCCAG ATCAAGGTCT ACGTCAAGCT GAATTTCGAT CCGAACGCGG CGCTCACCGA GGTTCTGTCG AAGGTCAATT CGGTGAGATA TCTGATCCCG AAGGAAGCCA ACGACCCGGT GATCCTGAAG TCCACCGGCG AGACCACGGC GGTGATGTAT ATCGGCTTCT CGAGCGATGA ACTGTCGGGC TCGGCGATTT CCGATTACCT GACGCGCGTG GTGCAGCCCA TCCTCTCGAC CGTGGACGGC GTGGCTTCGG CCGACATTCT CGGCGGTCAG ACCTTCGCGA TGCGGGTGTG GCTTGATCCG ATGAAGATGG CCGGACGCAA CGTGACCACC GCCGAAATCG CCATCGCGAT CGCCGCCAAT AATTTCCAGG CGGCGGCGGG CCAGACCAAG GGCTACTACA CGATCTCCAA CGTGACCACC AATACCGACC TGCAAAGCGT CGAGCAGTTT AAGCGCATGA CCGTGAAGGC CAAGGACGGC GGCTTCGTGC GCATGGAAGA CATCGCCACG GTGGAGCTGG CGGCGCAAAG CACGAACGCC AGCGTCGCTT TCAGCGGGCA GCGCGCGATC TTCATCGGCG TGCAGGCGAC CCCGCAGGGC AACCCGCTGA ACATCGTCGC CGGAGTGCGG GCGCTGTTTC CGGACATCGA GCGGAATCTT CCTCCCTCGA TGAAGATGAA GGTGGCTTAC GACTCGACCA AGTTCATTAC CTCCTCGATC CATGAGGTGC AGAATACGCT GATCGAGGCG GTCCTCATCG TTATCGTCGT GATCTTCCTG TTTCTCGCCT CGCTGCGTTC GGTCATCATC CCGGTGGTCA CGATTCCGCT GTCGCTGATC GGCGTTTGCG CGCTGATGCT GGCCGCGGGG TTCAGCTTCA ACCTGCTGAC GCTGCTGGCG ATGGTGCTGG CGATCGGCCT TGTGGTCGAT GACGCCATCG TGGTGGTGGA GAACATCCAC CGGCATCTCG AAGAGGGTAA GTCGGCGGTT CAGGCGTCCT TGCAGGGCGC GCGCGAAATC GTCGGCCCGG TCATCTCGAT GACGATCACG CTGGCCGCGG TGTATGCGCC GATCGGCTTC CTGGGCGGTC TCACCGGCGC GCTGTTTCGC GAATTCGCTT TCACGCTGGC CGGGGCGGTG ATCGTCTCCG GCGTCATCGC GCTGACACTG TCGCCGATGA TGTGCTCCGT GCTGCTCAAG CACGGCGGGC AGGGCTGGTT CGCCACGAAG GTCGACAGGA TCTTCAGTTC GGTGACCGAT TGGTATGGCC GGAAGCTGGA TCGCTCGCTC GACTACCGGC CGGTGACGGC GCTGTTCGCG GTGACGCTCC TCGGGCTGGT CGGCTTTCTT TACATGAACA CCTCAACGGA GTTGGCGCCC GAAGAGGATC AGGGCATCGT GTTCGCGGTC ATCAAGGCGC CGAAATACGC CAACCTCGAC TACATGGATT TTTACGGTAA CAAGCTCGAC AAGGCATATG CGAGTTTCCC CGAGACCGAC CTGCGCTTTG TGATCAACGG CACCAACGGC ATCAACGATG GTATCGCCGG CATGTTGTTG AAACCGTGGG ACGAGCGCAC GCGCTCCGCG ATGACCATCA AGCCGCTGGT GCAAGCTGAA ATCAGCAAGG TAGAGGGCGT GAGCGCTTTC GCCTTCAACC GGCCGCCGCT GCCGGGCGGT CCGGGCGGTC TGCCGGTGCA GATGGTGCTC TACAGCACAT CCAGCTTCCA GACGGTCTAT GAGGAAATGA ACAAGCTCAA GGAGGCGGCG CGGAAGAGCG GTCTGTTCAT CGTCTCCGAC AGCGACCTCG ACTATAACCA GCCGGTGGTT CGCGTCGCTA TCGATCGGAC CAAGGCGAAC GATCTCGGCG TCACCATGCA GCAACTCGGC GGGACGCTGG CGACGCTGCT CGGCGGCAAC TACGTGAACC GGTTCAACCT TCAGGGGCGC TCTTATCAGG TGATCCCGCA GGTGCCACGC GGCGAGCGCC TGTCGCCGCA ATCCCTCGAC GGGTATTACG TGCCGGGGGC CGGCGGCCAG CAGATTCCGC TGTCCACGCT GGTCTCGATC AAGACTGAAA CCGATCCCAA TGCGCTGACC CACTACAACC AGCTCAATGC GGCGACCTTC CAGGCCGTGC CGATGCCGGG CGTGACGGTG GGCAAGGCCG TGGAATTCCT GGAACAGCAG GCGAAAAATC TGCCGAAGGG TTTCAGTCAC GATTATCTCG CAGACGCCCG ACAATACGTC ACGGAAGGCA ATCAGCTCGC GATTGCCTTC GGCTTCGCGC TCATCATCAT CTTCCTGGTG CTGGCGGCGC AGTTCGAAAG CCTGCGTGAC CCGCTCGTCA TCATGATCAG CGTGCCGATG GCGATTCTCG GCGCGCTGAT CCCGCTGTTC TTCGGCGTCG CGACGATCAA CATCTATACC CAGGTGGGCC TGCTGACGCT GATCGGCCTT ATCAGCAAGC ACGGCATCCT GATGGTCGAA TTCGCCAACG AGCTTCAGAT CAACGAGAAG CTCGACAAGC GGGCGGCGAT CGAGAAAGCG GCGCGGGTCA GGCTGCGTCC AATCCTGATG ACGACCGCGG CGATGGTTAC AGGTCTGCTG CCGCTGCTGA CGGCGTCGGG AGCGGGCGCG GCGAGCCGGT TCTCGATCGG CCTCGTGGTC GTGGCCGGCA TGATGATCGG AACGCTGTTC ACTCTGTTCG TGCTTCCGGC TGTCTATGTT GCGATCGCGA CCGATCACCT TAGCGGCACC AAGTCTGAAC GTCGCAGGCA GATCGCCGAA TTCGACATGG AGTCGAAAGC GCTGCGACCG ACATAA
|
Protein sequence | MAFTDIFIKR PVLSIVVSLL ILLIGLAAAF NLPVRQYPKL SNTVITVTTI YPGASPDLMQ GFITTPIEQA VASAEGVDYI TSTSTQGQSQ IKVYVKLNFD PNAALTEVLS KVNSVRYLIP KEANDPVILK STGETTAVMY IGFSSDELSG SAISDYLTRV VQPILSTVDG VASADILGGQ TFAMRVWLDP MKMAGRNVTT AEIAIAIAAN NFQAAAGQTK GYYTISNVTT NTDLQSVEQF KRMTVKAKDG GFVRMEDIAT VELAAQSTNA SVAFSGQRAI FIGVQATPQG NPLNIVAGVR ALFPDIERNL PPSMKMKVAY DSTKFITSSI HEVQNTLIEA VLIVIVVIFL FLASLRSVII PVVTIPLSLI GVCALMLAAG FSFNLLTLLA MVLAIGLVVD DAIVVVENIH RHLEEGKSAV QASLQGAREI VGPVISMTIT LAAVYAPIGF LGGLTGALFR EFAFTLAGAV IVSGVIALTL SPMMCSVLLK HGGQGWFATK VDRIFSSVTD WYGRKLDRSL DYRPVTALFA VTLLGLVGFL YMNTSTELAP EEDQGIVFAV IKAPKYANLD YMDFYGNKLD KAYASFPETD LRFVINGTNG INDGIAGMLL KPWDERTRSA MTIKPLVQAE ISKVEGVSAF AFNRPPLPGG PGGLPVQMVL YSTSSFQTVY EEMNKLKEAA RKSGLFIVSD SDLDYNQPVV RVAIDRTKAN DLGVTMQQLG GTLATLLGGN YVNRFNLQGR SYQVIPQVPR GERLSPQSLD GYYVPGAGGQ QIPLSTLVSI KTETDPNALT HYNQLNAATF QAVPMPGVTV GKAVEFLEQQ AKNLPKGFSH DYLADARQYV TEGNQLAIAF GFALIIIFLV LAAQFESLRD PLVIMISVPM AILGALIPLF FGVATINIYT QVGLLTLIGL ISKHGILMVE FANELQINEK LDKRAAIEKA ARVRLRPILM TTAAMVTGLL PLLTASGAGA ASRFSIGLVV VAGMMIGTLF TLFVLPAVYV AIATDHLSGT KSERRRQIAE FDMESKALRP T
|
| |