Gene Nwi_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2282 
Symbol 
ID3675730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2491756 
End bp2493009 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content65% 
IMG OID637713845 
ProductFAD dependent oxidoreductase 
Protein accessionYP_318888 
Protein GI75676467 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.877617 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.634031 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCTAG TCAAATCCGA TGTTCTGGTT CTCGGCGCGG GAATTGTCGG CGTTTCCGCG 
GCGCTGCATC TTCAGAAGCG GGGGCGCGAT GTCATCCTGG TCGACCGGCA CGACGGGGCG
GGCCAGGAGA CGAGCTACGG AAACGCGGGC CTGATCGAAT CAGCGTCGGT TTTCCCGTAT
GTGTTTCCTT ACGATCTGCG TCAGGTTCTG CGCTATGCGC TGAACCGTTT CCCCGAAGCG
CATTATCGCT TCCGCGATCT GCCTGCGTTT TTGCCGTGGT TGATTCGCTA TGTTTTTGCG
TCCGCGCCCG AACGCGCGTT TCGCAGCGCG ATGGCGGCCC TGCCGCTGAT CAGCCGCAGC
TTGGCCGAGC ATGAGGCCCT GATCGCGGAA GCGGGCGTGC CGCAGCTTCT GCGCCGGACA
GGCTGGATCA AGCTGTTCCG GTCGACGGCG ACGCTGGACA AGGGCGTCGC TGACCTCGAA
CGCGTTCGCC CGTATGGGGT TGAAGGGGAT ATTCTCGACG CCAGGGCGAT AGCCGCGCGC
GAGCCGAATC TGTCCGGAAC GTTCGCCGGC GCCATTCACT GGCCAGCGCC GGGCTTTATT
CCGGATCCGG GAGCGCTGAC GAAGGCCTAT GCGGCGTTGT TCGTGCGTCG AGGCGGGCGT
TTCATCGTGG CTGACGCGCG CACGCTGACG CAAGGTCAGG CGGCATGGCG CGTCGAGGGT
CCGAACGGAG CGCTGATGGG GCGCGAGGCG GTGATTGCGC TGGGTCCGTG GTCCGATGAT
ATCTTCCGTC CGCTCGGCTA CGACATGCCG CTCGGCATCA AGCGCGGGTA TCACCTGCAT
TTGGCCCCAC GCGGCAATGC GGTTCTCAAT CGTCCGGTTC TCGATTCGGA TCGCGGCTAT
CTGCTGGCGC CGATGAATCA GGGCATTCGC CTCACGACCG GCGCGGAGTT CGCGCGGCGC
GATGCGCCTC CGACTCCCGT GCAGATCGAA CGAACGTTGC CTCTGGCGCG GGAATTGTTT
CCCCTCGGAG AGGCGATCGA GGCCACGCCC TGGATGGGAC GGCGTCCGTG CATGCCGGAT
ATGCTCCCGG TGATCGGAAA GGCGGCCCGC CATGACGGGT TGTGGTTCAA CTTCGGGCAC
CAGCATCACG GTCTGACCCT GGGCCCGGTC ACGGGCCGGC TGCTGGCGGA GATGATGACG
GGCGTCGAGC CGTTTGCGGA CCCGAGACCG TTTGCCGCGG AGCGCTTTCG TTAA
 
Protein sequence
MALVKSDVLV LGAGIVGVSA ALHLQKRGRD VILVDRHDGA GQETSYGNAG LIESASVFPY 
VFPYDLRQVL RYALNRFPEA HYRFRDLPAF LPWLIRYVFA SAPERAFRSA MAALPLISRS
LAEHEALIAE AGVPQLLRRT GWIKLFRSTA TLDKGVADLE RVRPYGVEGD ILDARAIAAR
EPNLSGTFAG AIHWPAPGFI PDPGALTKAY AALFVRRGGR FIVADARTLT QGQAAWRVEG
PNGALMGREA VIALGPWSDD IFRPLGYDMP LGIKRGYHLH LAPRGNAVLN RPVLDSDRGY
LLAPMNQGIR LTTGAEFARR DAPPTPVQIE RTLPLARELF PLGEAIEATP WMGRRPCMPD
MLPVIGKAAR HDGLWFNFGH QHHGLTLGPV TGRLLAEMMT GVEPFADPRP FAAERFR