Gene Nwi_2270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2270 
Symbol 
ID3675175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2474829 
End bp2476082 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID637713833 
Productamine oxidase 
Protein accessionYP_318876 
Protein GI75676455 
COG category[S] Function unknown 
COG ID[COG3349] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03467] squalene-associated FAD-dependent desaturase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.160101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACGGA CCGTTCATAT CGCCGGTGGC GGCATTTCCG GGCTTGCGGC GGGCGTGCGC 
CTGGCCGACG CCGGTTATCT GGTTCGCGTG CACGAGGCCG CGCAGCAGGT GGGCGGCCGT
TGCCGTTCCT ATTTCGACGG CGCGACCAAT CTGACGATCG ATAACGGCAA CCATCTGGTG
CTCTCCGGCA ACAACAATGT GATGGCCTAT GCACGCACGA TCGGCTCCGA AGCCGGCCTG
CGGGGGCCGC CGGAGGCCGA GTTCCAGTTC ATCGATCTTG CCGCCGATAA ACGCTGGACC
CTGCGGATCA ACGACGGGCG CGTTCCATTC TGGGTGTTCG ACCGCACTCG CCGGGTTCCG
GACACATCAC CCGCCGATTA CTTCGCGCTC GCGCCGCTGA TCTGGGCGAG CGCCGGCACG
CGGGTCGGCG ACGCCATCAA GTGCGAGGGC GTGCTTTACA AGCGGCTGGT GCTGCCGCTT
CTGCTTGCGG CGCTGAACAT CGATCCGCCC GATGGATCGG CCGGCCTTGC CGGTGCGATC
ATTCGCGAGA CGTTGCTGGC GGGTGGGCAG GCGTGCCGCC CGTTGATCGC GCGCGACGGG
CTGAGTTCGG TGCTGATCGA GCCGGCGATC GGTTACATTC GCGCCAGGGG CGGCAGCGTC
GATGTCGGCC ACGAGGTGAG GCGTCTCACG ATGGCGCACG GCAGGGTCAC GGAACTCGCG
CTCGGCGATC AGACCATCGC GCTCGGGCCT GAAGATGCCG TCGTGATGGC GGTTCCGCCG
CGCTCCGCGG CCATGTTGCT GCCCGGCCTG ACCGTGCCGA CCAGGTTCCG CGCCATCGTC
AACGCGCATT TCCGTTTCGT TCCGCCGCCG CATCATCCGC CGATGATCGG CGTCGTGAAC
GGCCTGATCG AATGGCTGTT CGCGTTTCCG GACCGATTTT CCATCACCAT CAGCGGTGGC
GACCGGCTGG TGGACATGCC GCGCGAGGAA CTGGCGCGGG CGATCTGGAA GGATATCTGC
GCGGTCGCCG GCCTCGAGGC CGAGATGCCG GCCTGGCAGA TCGTGCGCGA GCGCCGCGCC
ACATTCGAGG CTTCGCCCGA GCAGAATGCC CTGCGTCCGG GAACCCTGAC GGCTTGGAAA
AACCTGTTTC TCGCCGGCGA CTGGACTGAT ACGGGGTTGC CGGCAACCAT CGAGGGATCG
GTTCGCTCCG GAAACCGGGC CGCCGATCAC GTTCTGAAAA CCCGCTCAAT CTGA
 
Protein sequence
MERTVHIAGG GISGLAAGVR LADAGYLVRV HEAAQQVGGR CRSYFDGATN LTIDNGNHLV 
LSGNNNVMAY ARTIGSEAGL RGPPEAEFQF IDLAADKRWT LRINDGRVPF WVFDRTRRVP
DTSPADYFAL APLIWASAGT RVGDAIKCEG VLYKRLVLPL LLAALNIDPP DGSAGLAGAI
IRETLLAGGQ ACRPLIARDG LSSVLIEPAI GYIRARGGSV DVGHEVRRLT MAHGRVTELA
LGDQTIALGP EDAVVMAVPP RSAAMLLPGL TVPTRFRAIV NAHFRFVPPP HHPPMIGVVN
GLIEWLFAFP DRFSITISGG DRLVDMPREE LARAIWKDIC AVAGLEAEMP AWQIVRERRA
TFEASPEQNA LRPGTLTAWK NLFLAGDWTD TGLPATIEGS VRSGNRAADH VLKTRSI