| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2269 |
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| Symbol | |
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| ID | 3675174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2472851 |
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| End bp | 2474815 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637713832 |
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| Product | terpene synthase/squalene cyclase |
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| Protein accession | YP_318875 |
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| Protein GI | 75676454 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1657] Squalene cyclase |
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| TIGRFAM ID | [TIGR01507] squalene-hopene cyclase
[TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.178212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCCA TCAACGCCAC AGCCGCGCCG ATCGACGATA ATGTTCTCGG GGACCGTATC
GGCGCCGCGA CGCGCGGGCT TCTAAGCCTC AAGCAGTCGG ACGGTCATTT TGTGTTCGAA
CTCGAGGCCG ACGCAACCAT CCCGTCCGAA TACATCCTGA TGCGGCATTA CCTCGGCGAA
CCCGTCGATA CGGTGCTCGA AGCCAAGATC GCGGCTTACC TCCGCCGCAT CCAGGGCGCG
CATGGCGGCT GGCCGCTGGT GCATGACGGC CCGTTCGACA TGAGCGCCAG CGTGAAGGCC
TATTTCGCGC TGAAAATGGC CGGCGATTCC ATCGACGCGC CACACATGGC GCGGGCGCGC
GAGGCCATCC TGTCCCGAGG CGGCGCGGCG AATGTGAACG TCTTCACGCG CTTTCTGCTC
TCGTTTTTCG GCGAACTGAC GTGGCGCAGC GTTCCGGTGC TGCCGGTCGA GATCATGCTG
CTGCCGATGT GGTCGCCGTT CCATCTCAAC AAGGTCTCCT ACTGGGCGCG CACCACCATG
GTGCCGCTGA TGGTGCTGGC CGCGCTGAAG CCGCGCGCGC GCAATCCGCG CGGCATCGGC
ATCCGCGAAC TTTTTCTTGA GGATCCGGCG ACGGTAGGCA CGCCGAAGAG GGCTCCGCAC
CAAAGTCCGG GCTGGTTCGC GCTGTTTACC GGCTTTGACC GGGTCTTGCG GCTGATAGAA
CCGCTGTCTC CCAAGTGGCT GCGGGCGCGC GCCATGAAAA AGGCGATCGC GTTTGTCGAG
GAGCGCCTCA ACGGAGAGGA CGGCCTCGGC GCGATCTTTC CGCCGATGGT CAATACGGTG
ATGATGTATG ACGCGTTGGG ATTCCCACCG GAGCATCCGC CGCGCGCGGT GACGCGACGC
GGCATCGACA AGCTTCTGGT CGTCGGCGAA AATGAGGCCT ACTGCCAGCC ATGCGTGTCG
CCGATCTGGG ATACCGCGCT GAGCTGTCAC GCGCTGCTCG AAGCGGGCGG ACCTGAGGCC
GTAAACAGCG CCGGCAAATG CCTCGATTGG CTACTTCTGA AACAGGAACT GGTTCTCAAG
GGCGACTGGG CGGTGAAACG TCCGGACGTG CGGCCGGGCG GCTGGGCGTT TCAATACGCC
AACGGCCACT ATCCCGATCT CGACGATACC GCTGTCGTGG TCATGGCGAT GGATCGGGTG
CGCCGGAACG GCCCGAATGG TCGATACGAC GAAGCGATCG CGCGTGGTCG TGAGTGGATC
GAGGGGATGC AGAGCCGGGA CGGCGGCTTT GCCGCGTTCG ATGCCGACAA TCTTGAATAC
TACCTTAACA ACATCCCGTT CTCCGACCAT GCCGCTCTGC TCGATCCGCC GACCGAGGAT
GTCACCGCGC GGTGCGTCTC GATGCTGGCG CAACTCGGCG AGACCGTGGA CAGCAGCTCG
TCCATGGCGG CGGGAGTCGA GTATCTGCGC CGGACCCAGC TCGCGGAGGG TTCGTGGTAC
GGCCGCTGGG GCCTGAACTA CATCTACGGC ACCTGGTCAG TGCTCTGCGC GCTCAACGTC
GCCGGGGTCG ATCACCAGGA TCCCGTGATC CGCCGGGCGG TGAACTGGCT GGTGTCGATC
CAGAATGCCG ATGGCGGCTG GGGCGAGGAT GCGGTCAGCT ACCGACTCGA CTATAAGGGA
TTCGAGGGAG CGCCGACCAC GGCTTCGCAG ACGGCCTGGG CGTTGCTGGC CTTGATGGCG
GCGGGCGAGG TCGAAAATCC TGCGGTGGCG AGGGGAATCA AGTACCTGAT AGACACACAA
ACAAAAAAAG GTCTGTGGGA CGAGCAGCGC TATACGGCCA CGGGCTTTCC ACGCGTATTT
TATCTGAGGT ACCATGGCTA CTCCAAGTTC TTCCCGCTCT GGGCGCTGGC GCGGTATCGG
AATTTGAGAA GCACCAATAG CAAGGCGGTA GGGGTCGGGA TGTGA
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| Protein sequence | MNSINATAAP IDDNVLGDRI GAATRGLLSL KQSDGHFVFE LEADATIPSE YILMRHYLGE
PVDTVLEAKI AAYLRRIQGA HGGWPLVHDG PFDMSASVKA YFALKMAGDS IDAPHMARAR
EAILSRGGAA NVNVFTRFLL SFFGELTWRS VPVLPVEIML LPMWSPFHLN KVSYWARTTM
VPLMVLAALK PRARNPRGIG IRELFLEDPA TVGTPKRAPH QSPGWFALFT GFDRVLRLIE
PLSPKWLRAR AMKKAIAFVE ERLNGEDGLG AIFPPMVNTV MMYDALGFPP EHPPRAVTRR
GIDKLLVVGE NEAYCQPCVS PIWDTALSCH ALLEAGGPEA VNSAGKCLDW LLLKQELVLK
GDWAVKRPDV RPGGWAFQYA NGHYPDLDDT AVVVMAMDRV RRNGPNGRYD EAIARGREWI
EGMQSRDGGF AAFDADNLEY YLNNIPFSDH AALLDPPTED VTARCVSMLA QLGETVDSSS
SMAAGVEYLR RTQLAEGSWY GRWGLNYIYG TWSVLCALNV AGVDHQDPVI RRAVNWLVSI
QNADGGWGED AVSYRLDYKG FEGAPTTASQ TAWALLALMA AGEVENPAVA RGIKYLIDTQ
TKKGLWDEQR YTATGFPRVF YLRYHGYSKF FPLWALARYR NLRSTNSKAV GVGM
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