Gene Nwi_2254 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2254 
Symbol 
ID3677143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2451710 
End bp2452957 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content67% 
IMG OID637713817 
Productthreonine dehydratase 
Protein accessionYP_318860 
Protein GI75676439 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01127] threonine dehydratase, medium form 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG CGGAGCAGGG CAAATCCATC GGGACGGCGG ACCTGCAGGC CGCCGCCGCC 
CGGCTCGCCG GCCGCGTCGT TCGCACGCCG CTGGTTCATT CGCGCACGCT GTCGGAGATC
ACCGGGGCCG AGGTCTGGCT CAAGCTGGAA AATCAGCAGT TCGTCGCCTC TTTCAAGGAG
CGCGGCGCCG CCAACAAGAT TCTCACGCTG TCGGAAGACG AGGCGAAGCG CGGCGTCATT
GCCATGTCCG CGGGTAACCA CGCCCAGGGC GTCGCCTATC ACGCTCACAA TCTCGGAATC
GCCGCCACGA TCGTGATGCC GAAATCGACG CCTTTCGTGA AGGTGTCGCG AACCAGGAAG
CTGGGCGCGC GGGTTCGGCT CGAGGGTGAG ATCCTGGCGG AAGCCGCCGC CTTTGCCCGG
CAACTGGCCG CCGATGAGAA TCTTGTCTTT GTTCACCCTT ATAATGATCC GGCGGTGATC
GCCGGGCAGG GCACGGTGGC GCTTGAGATG CTGGAAGATC AACCGGCCCT CGACTGCATC
CTCACGCCGG TCGGCGGCGG GGGGCTGGTC GCAGGTTGCG CGATCGCGGC AGCGGATCAT
ACGTCGCAGG TCGAGGTCAT CGGCGTCGAG GTGGAATCCT ACGCCGCCGT GGTGCAGCAT
CTCGCCGGGC GTCCGGTCTC GGTCGGCGGC GCGACCATCG CCGAAGGCAT CGCGGTGCGC
GATGTCGGCG CGCTGCCGCT GGCGATCCTG CGCGAGCACG GCATCGAGGT GGTGACGGTG
GCTGAGCGCA TGATCGAGAA GGCTGTCATC CAGATGCTGG AAATCGAGAA GACCGTGACG
GAAGGCGCGG GCGCGGCCGC GCTCGCCGCG CTGATGAGCG ATCCCGGACG GTTTGTCGGG
CGCAAGGTCG GCTTGATCGT CTCCGGCGGC AACATCGATA CGCGGACGCT CGCCAATGTG
CTGATGCGAG GGCTGGTGCG CGACGGCCGG CTGATCGATC TCGTGGTGGA GATTTCCGAC
AAGCCGGGCG CGCTGGCTGA ACTCGCATGC ATCATCGCCG AACTCCGTGG CAACATCGTC
GAGGTGCAGC ATCAGCGCCT GTTCAGCGCA CTGTCCGCCA ACATGACCGA GGTCGAACTG
GTGATCGAGG CGCAGGACAC GGCGCACGGC AGCGCGATCG TCGCCGGGCT GGAAGCCAAG
GGTGTGAGAG CGCGCCGCCG TGACCGGCTG GTGCTATCGA GGGATTGA
 
Protein sequence
MSDAEQGKSI GTADLQAAAA RLAGRVVRTP LVHSRTLSEI TGAEVWLKLE NQQFVASFKE 
RGAANKILTL SEDEAKRGVI AMSAGNHAQG VAYHAHNLGI AATIVMPKST PFVKVSRTRK
LGARVRLEGE ILAEAAAFAR QLAADENLVF VHPYNDPAVI AGQGTVALEM LEDQPALDCI
LTPVGGGGLV AGCAIAAADH TSQVEVIGVE VESYAAVVQH LAGRPVSVGG ATIAEGIAVR
DVGALPLAIL REHGIEVVTV AERMIEKAVI QMLEIEKTVT EGAGAAALAA LMSDPGRFVG
RKVGLIVSGG NIDTRTLANV LMRGLVRDGR LIDLVVEISD KPGALAELAC IIAELRGNIV
EVQHQRLFSA LSANMTEVEL VIEAQDTAHG SAIVAGLEAK GVRARRRDRL VLSRD