Gene Nwi_2242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2242 
Symbol 
ID3677131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2438008 
End bp2439300 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content64% 
IMG OID637713805 
ProductBcr/CflA subfamily drug resistance transporter 
Protein accessionYP_318848 
Protein GI75676427 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.187977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCGT ACCGATCCTT TCGAGACACA TCGATGACCG ACGCCGATAT GGACGGATGG 
GTGTCGCGAG CCCATCAGCC GAGAGGGTTC CCTGAATTCG TCGCCCTCGT CGCCTGCATC
ATGGCGCTGA ACCCGATCGC GACCGACATG ATGCTGCCGG CGATGCCGGA CGTCCGCGAT
GCCTACGCCA TCGTTCACCC CAATCATGTC CAGGCCGTAA TCTCGGTGTA TCTGGCCGGC
TTCGGCGCGG GCCAGTTCAT CATGGGTCCG CTGTCGGACC GGTTCGGCCG CCGCCCGATC
CTGATCGGCG GAATGCTGCT CTACAGCGCG GCTGGCCTGT TGTCGGTGGT CGCGTCCTCG
TTTGAAACGA TGCTGCTGGC GCGCGTGCTG CAGGGAATCG GAAGTTCGGC CGCCCGCGTC
ATCGCCACCT CTATCGTGCG CGACTGCTAC AGTGGCCGGC GCATGGCGAG CGTGATGTCG
CTTGCGATGA TGATCTTCAT CTCGGTGCCC GTGCTTGCGC CATCACTCGG ACAGGCGATC
CTGCTGTTCT CGGAATGGCG CGGCATCTTC GTGGTGCTGA CCGCCTACGG CCTGCTCGCT
TTGCTGTGGT GCGCGCTCCG ATTGCCAGAG ACCCTGCCGC CCGCGGGGCG CAAGCCGCTG
ACCGCCGCAA ACGTCTTCGA CGCATTCCGT CAGACCGTCA CCAACCGGCA GACCATCGGC
TACGCGCTCG CGGCCGGCGG CGTGCAGAGC GTGCTGTTCG CCTATGTCTT TTGTTCGCAA
CAGATCTTCA CCGGGATCTA CGGCCTCGGC GACTATTTCC CGCTCGCCTT CGCCGCCATC
GCCACCGGCC TCGCCGCCGC TGGTTTTCTG AACGCCCGCA TCGTCGGCCG GTTCGGCATG
CGGGTGATTT CGCACGGCGC GTTGACGGGA TCGGTGGTGA TTGCTGCGCT GACGTTGCTC
GCGGCGTGGC AGGGCTGGCT ATCGTTTCCG GTTTACATGG TGTTTGCGAT CGGCACGATG
TTCGCGTTCG GGCTGATGTT CTCAAACTTC ACCGCGCTCG CGATGGAGCC GCAAGGCCAT
ATCGCCGGAA CCGCCTCATC CCTGTTCGGC TCGATCACGA CATTGATAGG CAGCGGCGTC
GGCGCCATGA TCGGACAGGA CTTCAACGGC ACCATGCTGC GGTTCACAGC AAGCGCCTTC
CTTTGCACCA TCGCCGCTTT GGTCGTCGTG ATCGTTGTCG AGCGCGGACG GTTGTTCGTG
CCCCACAACC CCGCGGTCCC GCCGCCGCGT TAA
 
Protein sequence
MAAYRSFRDT SMTDADMDGW VSRAHQPRGF PEFVALVACI MALNPIATDM MLPAMPDVRD 
AYAIVHPNHV QAVISVYLAG FGAGQFIMGP LSDRFGRRPI LIGGMLLYSA AGLLSVVASS
FETMLLARVL QGIGSSAARV IATSIVRDCY SGRRMASVMS LAMMIFISVP VLAPSLGQAI
LLFSEWRGIF VVLTAYGLLA LLWCALRLPE TLPPAGRKPL TAANVFDAFR QTVTNRQTIG
YALAAGGVQS VLFAYVFCSQ QIFTGIYGLG DYFPLAFAAI ATGLAAAGFL NARIVGRFGM
RVISHGALTG SVVIAALTLL AAWQGWLSFP VYMVFAIGTM FAFGLMFSNF TALAMEPQGH
IAGTASSLFG SITTLIGSGV GAMIGQDFNG TMLRFTASAF LCTIAALVVV IVVERGRLFV
PHNPAVPPPR