Gene Nwi_2218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2218 
Symbol 
ID3676416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2410903 
End bp2411604 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content63% 
IMG OID637713781 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_318824 
Protein GI75676403 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAGA CTTTTGCGCC GCGTCCTCTC GTCATCGCAC CGTCGATCCT GGCCTCGGAC 
TTCTCGAAGC TTGGCGATGA GGTTCGCGCC GTCGATCAGG GGGGGGCCGA GTGGATCCAC
CTCGACGTGA TGGACGGCCA TTTCGTGCCG AACATCTCCT ATGGGCCCGA TGTCATCAAG
GCGATGCGTC CGCACAGCAA GAAGATCTTC GATGCCCATT TGATGATCTC GCCATGCGAT
CCGTACCTCG AAGCCTTCGC CAAGGCAGGT TGCGACCACA TCACGGTTCA CGTCGAAGCG
GGACCGCACC TGCATCGCTC GCTGCAAGCC ATTCGCAACC TCGGCAAGAA GGCGGGGGTC
ACGCTCAATC CCGGAACGCC ATTGTCCACC GTCGAATACG TGCTCGACAT GGTCGACCTG
GTGCTGGTGA TGTCGGTCAA CCCCGGTTTC GGAGGCCAGA AGTTCATCTC CTCTGCGGTC
GACAAGATTC GGGATTTGCG CGCGATGATC GGGGGACGGC CGATCGACAT CGAGGTCGAC
GGCGGGGTCG GACCCGACGT CGCGGGTGAT CTGGCCGCCG CCGGCGCCAA CGCCTTCGTG
GCGGGCTCCG CGGTGTTCAA GGGCGGCACG ATGGAATCCT ACAAGGCCAA CATGGACGCG
ATCCGCAATG CCGCCGCCGC GGCGCGCGGC GAAATAGTCT GA
 
Protein sequence
MSQTFAPRPL VIAPSILASD FSKLGDEVRA VDQGGAEWIH LDVMDGHFVP NISYGPDVIK 
AMRPHSKKIF DAHLMISPCD PYLEAFAKAG CDHITVHVEA GPHLHRSLQA IRNLGKKAGV
TLNPGTPLST VEYVLDMVDL VLVMSVNPGF GGQKFISSAV DKIRDLRAMI GGRPIDIEVD
GGVGPDVAGD LAAAGANAFV AGSAVFKGGT MESYKANMDA IRNAAAAARG EIV