Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_2213 |
Symbol | |
ID | 3676881 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | + |
Start bp | 2405842 |
End bp | 2406957 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637713776 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_318819 |
Protein GI | 75676398 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.650544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCAT TGAAGCTGAT CTGCCTGGCC CTTTGCGCCT CCCTGGCGCT GTCGGCCACG GCGTTCGCCC AGGACATCAC CGTCGCGGTG GCCGGCCCGA TGACGGGCAG CGAATCCGCT TTCGGCCGCC AGTTGCATAA CGGCGCCGAG CAGTTCGTCG CCGATGCCAA CGATATGGGC GGCGTGCTCA ACAAGAAACT CAAGCTGTTC GTCGGCGATG ACGCCTGCGA CCCGAAGCAA GCGCGCTCCA TCGCTGAACG AATCGCAAGC CGGGGCATTC CGCTCGTCGC CGGACACTTC TGCTCGTCGT CGTCCATTCC GGCTTCAGAA GCCTACGCCG ACGGAAATAC ACTACAGATC ACACCGGCCA CCACCAACCC GCTGTTCACG GAACGCAAGC TGTGGAACGT GCTGCGCGTC TGCGGCCGCG ACGACCAGCA AGGCATCGTC GCCGCCGAAT ACATCGTCAA AAATTTCAAA GACAAGAACA TCGCCATCCT CAACGACAAG ACCACCTACG GCAAGGGACT CGCCGACGAA ACCAAGAAGG CGCTGAACAA GGCCGGCTTT CAGGAGAAAA TGTTCGAGTC CTACAACAAG GGCGACAAGG ACTTTAACTC CATCGTCTCC CGCCTGAAGC GCGACAACAT CGATCTGGTG TTCATCGGAG GCTATTATCA GGAAGCCGGA CTGATCCTGC GGCAGATGCG TGATCAGGGA CTCAAGACCA TCATGATGGC GGGCGATGCG CTGAACGACA AGAAGTTTGC CTCCATCACC GGCCCGCTTG CCGAAGGAAC GCTGTTCACC TTCGGTCCCG ACCCGCGCAA CAAGCCGACC GCCAAGGCAG TCGTCGAGAA ATTCAAGGCC AGGGGCATCG ATCCGGAAGG CTACACACTC TACACCTATG CGGCGATGCA GGTGTGGGCG CAGGGCGCAG CGAAAGCGGG CACCACGGAC CCGATGAAGG TGATGAAAGC CATCAAGGCA GGCGCGTGGG ATACCGTCCT CGGCAAGCTG GAATTCGATG CGAAGGGTGA CATCAGGCAA ATCGACTATG TCATTTACAA GTGGGACGAC AAGGGCAACT ACGCTGAAAT CGACCCTGCT TTGTGA
|
Protein sequence | MKSLKLICLA LCASLALSAT AFAQDITVAV AGPMTGSESA FGRQLHNGAE QFVADANDMG GVLNKKLKLF VGDDACDPKQ ARSIAERIAS RGIPLVAGHF CSSSSIPASE AYADGNTLQI TPATTNPLFT ERKLWNVLRV CGRDDQQGIV AAEYIVKNFK DKNIAILNDK TTYGKGLADE TKKALNKAGF QEKMFESYNK GDKDFNSIVS RLKRDNIDLV FIGGYYQEAG LILRQMRDQG LKTIMMAGDA LNDKKFASIT GPLAEGTLFT FGPDPRNKPT AKAVVEKFKA RGIDPEGYTL YTYAAMQVWA QGAAKAGTTD PMKVMKAIKA GAWDTVLGKL EFDAKGDIRQ IDYVIYKWDD KGNYAEIDPA L
|
| |