Gene Nwi_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2212 
Symbol 
ID3676880 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2404811 
End bp2405554 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content66% 
IMG OID637713775 
ProductABC transporter, ATPase subunit 
Protein accessionYP_318818 
Protein GI75676397 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.618749 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG GCGCAACGCC CCTGCTCGCC ATTCGCGGGC TGCGCGCCGC CTATGGCAAG 
ATCGAAGCCC TGAAAGGCAT CGATCTCGAA ATCCAGGCCG GCGAGATCGT CGCGTTGATC
GGCGCCAACG GCGCCGGCAA ATCGACCTTG ATGATGACCA TTTTCGGCCG TCCCCGCGCC
CGCGCCGGCC AGATCCTGTT CGACGGCCAG GACATCAGCT CCATGCCGAC GCACGAGGTG
GCTCGGCTGC GCATCGCGCA GTCCCCGGAG GGGCGGCGCA TTTTCCCGCG CATGACGGTC
GCGGAGAACC TGCAGATGGG CGCGGACGCC ACGCCCGGCA GCAAGGCTGA GCGAGCCGCC
AGCCTGGATC GCGTGCTAAA ATTGTTTCCG CGGCTACAGG AACGCATGAC GCAGCGCGGC
GGCACGCTGT CCGGCGGCGA GCAGCAGATG CTGGCGATCG GCCGCGCGCT GATGAGCCGC
CCGCGCCTGT TATTGCTGGA CGAACCTTCG CTTGGTCTTG CGCCGCTGAT CACCCGGCAG
ATTTTCAGCG CCATCCGCGC GTTGAACAAC GAGGACCATC TCACGGTGCT GATCGTCGAG
CAGAACGCCA ATCATGCCCT TCGCCTCGCC CATCGCGGCT ATGTGATGGT CAACGGGCTG
ATCACGATGA GCGGCGAAGG CATGGAGTTG CTGCAACGCC CGGAAATCCG CGCAGCCTAT
CTCGAAGGCG GCCGCCATGC CTGA
 
Protein sequence
MNAGATPLLA IRGLRAAYGK IEALKGIDLE IQAGEIVALI GANGAGKSTL MMTIFGRPRA 
RAGQILFDGQ DISSMPTHEV ARLRIAQSPE GRRIFPRMTV AENLQMGADA TPGSKAERAA
SLDRVLKLFP RLQERMTQRG GTLSGGEQQM LAIGRALMSR PRLLLLDEPS LGLAPLITRQ
IFSAIRALNN EDHLTVLIVE QNANHALRLA HRGYVMVNGL ITMSGEGMEL LQRPEIRAAY
LEGGRHA