| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2144 |
|---|
| Symbol | |
|---|
| ID | 3677085 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2341024 |
|---|
| End bp | 2342322 |
|---|
| Gene Length | 1299 bp |
|---|
| Protein Length | 432 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637713706 |
|---|
| Product | tRNA and rRNA cytosine-C5-methylase |
|---|
| Protein accession | YP_318750 |
|---|
| Protein GI | 75676329 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACCCT CCGCGCGGCT CTCCGCCGCT ATCGAAGTGA TCGAGGCCAT CGACAACCAG
CGGATACCTG CGGCGAAGGC GCTCAAGGAG TGGGGCACGG CGCATCGTTT CGCCGGCTCC
GGCGACCGCG CCGCGATCTC CGGACTGGTC TACGACGTGC TGCGCCGTCA GGCGTCCAGC
GCCTGGATCA TGGACGACGA TACCCCGCGC GCGCGCCTGC TCGGTACGCT GAAACTGGAG
CGCGGCATCA ATACTGACGC GATCGCGTCA CTGTGCGACG GCGGCCGTTT CGCACCTGAA
CCGCTGACCG AGGGGGAGCG GCAGGCTTTG GCCTCGCGCT CGCTGGGGGA TGCGCCCGCG
CATATCGCCG GCGATTATCC GCAATGGCTC GACGTCTATC TGGATGAGGC GTTCGGCGAT
GATCGTGCCG CCGAGGCGGC CGCGATGGCG TGCCGCGCGC CGCTGGATCT GCGCATCAAC
ACGCTGAAAG CGAAACGCGA CAAGGTTCTG GGATCGCTGC AACATCTCGG CGTGACGGCG
ACGCCGTGGT CGCCGCTGGG CTTGAGGATC ATGCTGGGCG CGGATGCACG CAATCCCGGC
ATTCAGGCTG AGGAAGAGTT TATCAAGGGC GCCGTCGAGG TGCAGGACGA GGGCTCGCAA
ATCGCGGCGC TGCTGTCGGG AGCGAGGCCG GGCGAGCAGG TAATCGATCT TTGCGCCGGC
GCTGGCGGCA AGACGCTGAC GCTGGCCGCC ATGATGCAGG GCAGGGGCCG CCTTATCGCG
ACCGATCGCG ACAAGCGGCA GCTTGCGCCG ATCCATGAGC GGCTGTCCCG TGCCGGGGTC
CATAACGCCG AGGTTCGAAC CCCGAAGGGC GAGGACGATC CGTTGTCCGA TATCCGGGCG
TCGGCCGATC TCGTGCTGAT CGACGCGCCC TGCACCGGGA CCGGCACCTG GCGGCGCAAC
CCGGACGCGA AATGGCGGAT GCGGCCCGGC GCGCTCGATA TTCGTTTGAA GGATCAGGCC
GAAGTGCTTG ATCGCGCGTC CGCTCTTGTG AAACCGGGTG GACGCGTCGT CTACATCACC
TGCTCGGTGC TGCCGCAGGA AAACAGCGGG CAAATCCGTA AGTTTATCGG GCGACATCCG
GATTTCTCGG TAATCCCGCC GTCGCCGACC GCTTCGGTGC TGTGGGACAG GACGGACGAT
TTCCTCGCCG CGGTTTATGC GTCGGACGAG GGATTGCTGA TGACCCCGCG CCGGACCGGA
ACGGATGGGT TTTTCGTTTC GATTCTGACG AAGCGCTGA
|
|---|
| Protein sequence | MTPSARLSAA IEVIEAIDNQ RIPAAKALKE WGTAHRFAGS GDRAAISGLV YDVLRRQASS
AWIMDDDTPR ARLLGTLKLE RGINTDAIAS LCDGGRFAPE PLTEGERQAL ASRSLGDAPA
HIAGDYPQWL DVYLDEAFGD DRAAEAAAMA CRAPLDLRIN TLKAKRDKVL GSLQHLGVTA
TPWSPLGLRI MLGADARNPG IQAEEEFIKG AVEVQDEGSQ IAALLSGARP GEQVIDLCAG
AGGKTLTLAA MMQGRGRLIA TDRDKRQLAP IHERLSRAGV HNAEVRTPKG EDDPLSDIRA
SADLVLIDAP CTGTGTWRRN PDAKWRMRPG ALDIRLKDQA EVLDRASALV KPGGRVVYIT
CSVLPQENSG QIRKFIGRHP DFSVIPPSPT ASVLWDRTDD FLAAVYASDE GLLMTPRRTG
TDGFFVSILT KR
|
|---|
| |