Gene Nwi_2142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2142 
Symbol 
ID3677083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2337715 
End bp2338971 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content64% 
IMG OID637713704 
Productphage integrase 
Protein accessionYP_318748 
Protein GI75676327 
COG category[L] Replication, recombination and repair 
COG ID[COG0582] Integrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.306676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACGG ACGTGGCTCT TAAGAACTTG AAACCAAAGG AGAAACCGTA CAAGGTCACC 
GACCGTGACG GTATGTATGT GCTGGTGAGC ACGACGGGAA CGGTGTCGTT CCGCCTGGAC
TACCGTCTGA ACGGGCGGCG CGAGACCGTC GTGCTGGGGA GGTACGACAA GGCCGGCATC
TCGCTCGCGC GAGCGCGGGA ACTGTGCATC GACGCCAAGC GCATGATCCG GGAGGGGCGC
TCGCCCGCCT TTGAAAAGCA GCGGGCCAAG CGGCGTCTTC TCGAGGCGAA GAGCTTCGGC
GAGTTCGGTG AGAAGTGGCT GACCATGGCG CCGATGGCCG ACAGCACGCG GTCCATGCGC
CGGGCGATCT TCGAGCGAGA ACTCCTGCCG ACCTGGCGCA AGCGGCTTCT CACGGAGATC
ACGCCGGACG ACCTGCGGGC ACATTGCGGG GCCATCGTCG ACCGCGGCGC GCCGGCGACG
GCGCTGCACG TCCGCGACAT CGTCAAGCAG ATCTACGGCT TCGCCATCCT CCACGGCGAG
AAGGTCGCCA ATCCGGCCGA TGAGGTCGGC CCCTCGGCGA TCGCCCATTT CACCCCAAGG
GACCGGTCGC TGTCGCCGAC CGAAATCAGG ATCATGCTCA AGCAGCTGGA GAATGTCGCA
ACGCTGCCGA CGATCCGTCT CGGTTTGAAG CTGATCCTGC TGACGATGGT GCGGAAGAGC
GAGCTGCAGG ACGCGGTGTG GGACGAGATC GATTTCGAGA ACGGCGTCTG GACGATCCCG
AAGGAGCGGA TGAAGCGCTC CAAGGCGCAC AACGTCTATC TGTCGCGCCA GGCGCTCGAC
ATCTTCATCG CCCTCAAGAC CTGTGCCGGC AACTCACGGT ACGTCCTGCC GTCGCGCTAC
GATGCCGATG CGCCCATGTC GCGGGCCACC TTCAACCGCG TCACCTATCT CGTCGTGGAG
CAGGCGAAGA AGGAAGGGCT GCCGCTCGAG CCGTTCACCG TCCATGACCT GCGCCGGACC
GGATCGACGC TGCTCAACGA GCTCGGCTTC AACAGCGACT GGATCGAAAA GTGCCTCGCG
CATGAGGAGG GCCGTTCCTC GCGCGGCGTC TACAACAAGG CCGAGTACGA GGTGCAGCGC
CGGCACATGC TGCAAGAGTG GTCGAATATC GTCGATGCGT GGGTGGCAGG CGAGAAATAC
GTGCCGGTGC TCATCCCGCC TTCGATGCCT CTCCTCGCGC CTGATCCCGC TCTCTGA
 
Protein sequence
MLTDVALKNL KPKEKPYKVT DRDGMYVLVS TTGTVSFRLD YRLNGRRETV VLGRYDKAGI 
SLARARELCI DAKRMIREGR SPAFEKQRAK RRLLEAKSFG EFGEKWLTMA PMADSTRSMR
RAIFERELLP TWRKRLLTEI TPDDLRAHCG AIVDRGAPAT ALHVRDIVKQ IYGFAILHGE
KVANPADEVG PSAIAHFTPR DRSLSPTEIR IMLKQLENVA TLPTIRLGLK LILLTMVRKS
ELQDAVWDEI DFENGVWTIP KERMKRSKAH NVYLSRQALD IFIALKTCAG NSRYVLPSRY
DADAPMSRAT FNRVTYLVVE QAKKEGLPLE PFTVHDLRRT GSTLLNELGF NSDWIEKCLA
HEEGRSSRGV YNKAEYEVQR RHMLQEWSNI VDAWVAGEKY VPVLIPPSMP LLAPDPAL