| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2138 |
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| Symbol | |
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| ID | 3677079 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2335204 |
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| End bp | 2336091 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637713700 |
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| Product | RNA polymerase sigma factor SigJ |
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| Protein accession | YP_318744 |
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| Protein GI | 75676323 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.294808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGATG AGCGCAGCGA GCCAAAGCGC ACATGGGAGG CGTCGCTGGA TGGACTGCGC
CCACGGCTGA TCCGCGTCGC GTACCGCATG CTGGGCTCGG TCACGGATGC GGAGGATGTC
GTACAGGAAG CATTCCTGCG ATCTCTGCGC GTTCATCGCG ATGATATTCG CGACGCCGAA
GCCTGGCTGC GCCGGGTGGT CACCCGGCTC AGCCTCAATC ATCTCCGGTC CGCGCGCCGT
CGAAGGGAAA CCTACATCGG GCCTTGGCTG CCCGAACCGG TGATCGAGCC GATGGAGAAC
GCATTCGACG ACGTCACCCT GCCGCTGCTG CTGGCACTGG AGCGTCTCTC TCCTCTGGAG
CGTGCCGCAT TTCTTCTGCA CGACGTCTTC GGCATGAGTT TCGACGAAAT CGCACGGACG
CTCGACCGAA CGCCGGCGGC GTGCCGTCAG CTTGCGAGCC GCGCGAGAGC CCATGTGCGT
GTGGCACGAC CTCGCTTCCC GGTGCCGAAG GAACGTGGCA TAGAGATCGC CGAAGCGTTC
TTCGCCGCGT CCCGCAGCGG AGACATCCAG ACCCTGCGGT CGTTGCTGGC GGATGATGTG
ACAGCCTTTG CCGATGGTGG CGGCAAGACA GGCGCCACGC TCGAACCCGT TGTCGGGTGC
GACGAGGTCG CGCGGCTCCA TGAGAAGCTT GCCGCTCTCT TCGCGGAGAC ACCATCACGG
CTTATCCGCT ACGGCCTGAT CAACGGCTTG CCGGGCTTCG TCACGATCGA GAAAGCGACC
ATGCTGCAAA CGACGGCGCT CGAGCTCGAG AATGACAAGA TCGTGGCGAT CTATGTCGTG
CAGAACCCGG ATAAGCTGCA GCATCTCGCC GGCGTTGCGG TTCACTGA
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| Protein sequence | MSDERSEPKR TWEASLDGLR PRLIRVAYRM LGSVTDAEDV VQEAFLRSLR VHRDDIRDAE
AWLRRVVTRL SLNHLRSARR RRETYIGPWL PEPVIEPMEN AFDDVTLPLL LALERLSPLE
RAAFLLHDVF GMSFDEIART LDRTPAACRQ LASRARAHVR VARPRFPVPK ERGIEIAEAF
FAASRSGDIQ TLRSLLADDV TAFADGGGKT GATLEPVVGC DEVARLHEKL AALFAETPSR
LIRYGLINGL PGFVTIEKAT MLQTTALELE NDKIVAIYVV QNPDKLQHLA GVAVH
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