Gene Nwi_2111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2111 
Symbol 
ID3675458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2306249 
End bp2308474 
Gene Length2226 bp 
Protein Length741 aa 
Translation table11 
GC content62% 
IMG OID637713674 
Productamylo-alpha-1,6-glucosidase 
Protein accessionYP_318718 
Protein GI75676297 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3408] Glycogen debranching enzyme 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGT CATCGGGGGG CGCCGGCACG GTGGTACACA CTGCGCCGTT GGCGGGAGCT 
GGCGCCGCGC CGTTAGCGCA ATTCTTCATT CCGGCGACCG CCTCGCTGCA GGAGCGCCGG
CCCCGCACGC TCAAACACGG CGACACCTTC GCCGTGTTTG ACCACAATGG CGATGCCCTG
TCGGGACCCG GGAGTCCCGA GGGGCTCTTT CACCGCGACA CGCGACATCT GTCGCACCTT
TATCTGACCA TCGAAGGAAC GCGGCCGATG CTGTTGTCGT CGACGCTTCG CGACGACAAT
GCAACGCTTA CATGTGACCT GACCAATCCG GACATCTATG ACAGCAATGG GCGCCTGAGC
TTTTCGCACG ATCTCGTCCA TATTCGTCGG TCGCGGTTGT TGTGGAACGC GACCTGCTTC
GAGCGATTGG TCGTGCGCAA TTTCGACGAG CGTCCGCGGC GCCTCACCAT CGAGATTGCC
TTCGACGCCG ATTTCGCGGA CATCTTCGAG GTGCGTGGCA CGCGCCGTGA GCGTCGGGGC
CTCATCCAGT CTCCGGAAGT CTCCCCGAGC CGCGTGACTT TGAACTACAT GGGACTCGAT
CATCGGCATC GATCCACCAC GTTGTCGTTC GATCCAGCTC CAACCCGGCT GACCGGAAGG
AGTGCGCTCT TCACGGTCGC AATCGCGCCG CGAGAATCCC GTTCGCTCTT TCTGGAAATC
CACTGCGGCT CCGAAGGAAT GACCCAGCAT GCCCCACGCC GCGCATTTTT CAGCGCTCTG
CGTGACGCGC GCCGCGCACT ACGGAGTTCC TCCTCGCGGG CCGCATCGAT CGCGACATCC
AACGAGATCT TCAATGAGGC TGTGCGGCGC AGCGTCTCCG ATCTTTACAT GCTGGCAACG
GATACGCCCG AGGGACCTTG TCCATATGCC GGTATTCCCT GGTTTTCGAC GGTCTTTGGC
CGCGACGCCC TGATCACTGC CTTGCAAACG CTCTGGCTTG ATCCCGCGCT AGCGCGCGGT
GTGCTGTTGC ATCTCGCGGC CCATCAGGCG ACCAGCACCG ACCCACTGGC CGATGCCGAA
CCGGGCAAGA TTCTACATGA GGTGCGAGTC GGGGAGATGG CCGAACTCGG CGAGGTGCCG
TTCCGACGAT ATTACGGCAG CGTCGATTCA ACGCCGCTCT TTGTCGTGCT GGCCGGCGCC
TATCTGGACC GAACGGGCGA CGTCGTTACT ATTCGTCGCC TATGGCCACA CATCGAGGCA
GCCCTCACGT GGATTGAGCA ATACGGTGAT CGCGACGGCG ACGGCTTTGT AGAATATCAC
AGACAGACGT CCGAGGGGTT GATCAACCAA GGTTGGAAGG ACAGTTACGA TTCAGTTTTT
CACGCCGATG GCACGTTTGC GAAGGGCCCC ATCGCCCTTG TCGAGGTGCA AGCCTATGTC
TACGGCGCAT GGTGCGCCGC TGCCAAGATT GCGGAGCAAT TGGGATACGT CCTGCGTGAG
ACGGAGTGCG AGGCGCGGGC GAACAGGCTG CGCGAGGCAT ATGATGCCCA CTTCTTCGAT
GAAGAGCTTG GCACTTATGC GCTGGCGCTT GATGGCGACA AGCGCCGATG TCGCGTGCGC
ACGTCCAATG CAGGTCACGC GCTGTGGACC AGCGTCGCAT TACCGGAACG GGCAGGACCG
GTCGTGCGGA GCCTGATGGG GGGATCCTCG TTCTGTGGCT GGGGTGTGCG CACGGTTGCG
TCGACGGAAG CCCGTTACAA TCCGATGAGT TATCATAATG GCTCGGTCTG GCCACATGAC
AATGCGCTGC TCGCAGCGGG ATTTGCGCGC TATGGGTTTC GGCGAGAAGC AGCCCGAATC
TTCGAAGGCT TGTTCGCGGC CTCCAGCTAT ATCGACCTGA GACGGCTTCC CGAATTGTTC
TGCGGATTTC CGCGTCAGCG CACTCGAGGT CCAACCTTTT ATCCCGTGGC CTGCACGCCG
CAAGCCTGGG CGGCTGCGGC GCCCCTTTAT ATGCTGCAGA TCTGTCTTGG GCTCGGCTTC
GACCCTGGTG AAAGGCGGAT CACCTTCGAA GAGCCGATGA TGCCGGCCTT TCTGAATGAG
GTCCTCCTCC GCAATCTGTC GATTGGCGAT GACACAGCCG ATGTCGCGGT ACGGCGATCC
GGTCAGCAGG TCGTCGTCGA CGTCCTCGCG CGACGAGGGC CAGTGCGAGT GCTGACGACC
AACTGA
 
Protein sequence
MTTSSGGAGT VVHTAPLAGA GAAPLAQFFI PATASLQERR PRTLKHGDTF AVFDHNGDAL 
SGPGSPEGLF HRDTRHLSHL YLTIEGTRPM LLSSTLRDDN ATLTCDLTNP DIYDSNGRLS
FSHDLVHIRR SRLLWNATCF ERLVVRNFDE RPRRLTIEIA FDADFADIFE VRGTRRERRG
LIQSPEVSPS RVTLNYMGLD HRHRSTTLSF DPAPTRLTGR SALFTVAIAP RESRSLFLEI
HCGSEGMTQH APRRAFFSAL RDARRALRSS SSRAASIATS NEIFNEAVRR SVSDLYMLAT
DTPEGPCPYA GIPWFSTVFG RDALITALQT LWLDPALARG VLLHLAAHQA TSTDPLADAE
PGKILHEVRV GEMAELGEVP FRRYYGSVDS TPLFVVLAGA YLDRTGDVVT IRRLWPHIEA
ALTWIEQYGD RDGDGFVEYH RQTSEGLINQ GWKDSYDSVF HADGTFAKGP IALVEVQAYV
YGAWCAAAKI AEQLGYVLRE TECEARANRL REAYDAHFFD EELGTYALAL DGDKRRCRVR
TSNAGHALWT SVALPERAGP VVRSLMGGSS FCGWGVRTVA STEARYNPMS YHNGSVWPHD
NALLAAGFAR YGFRREAARI FEGLFAASSY IDLRRLPELF CGFPRQRTRG PTFYPVACTP
QAWAAAAPLY MLQICLGLGF DPGERRITFE EPMMPAFLNE VLLRNLSIGD DTADVAVRRS
GQQVVVDVLA RRGPVRVLTT N