Gene Nwi_2084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2084 
Symbol 
ID3677245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2283062 
End bp2283469 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content53% 
IMG OID637713649 
Productdivergent AAA region 
Protein accessionYP_318693 
Protein GI75676272 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.497784 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCCG TTGACCTATC TGATCTTTTG GCGGGGACAA GCGAGAACCT TGGCATTGAG 
TTCAAGGCGT GGATGGACAC CTCGAACGGC GAAGTTCGTG CAAAGCTTGC TCGTCACATA
GCAGCGCTGG CCAATCATGG CGGCGGCTAT CTGATTTTTG GTGTGGATGA CAAGACGCGA
AAGCCTCTTG GAAAGACTGA GTTTAACCTC GACCTGTTCA GCCAGGATGC GATCACGGGG
ATCATCAAGA AATATCTCGA TCCGAGGATA CAGGTCCTCG TCGAACACGT CGTGCTTGAA
GGGACTACCT ATCCAGTGGT TGTCATTCCA CCACATGGCG CACGTCCGGT CTTTGCGATC
GCTGATGGAC CGCAGGATGA TCGCAATCGA CCGGTCGGCG TAACTTAA
 
Protein sequence
MASVDLSDLL AGTSENLGIE FKAWMDTSNG EVRAKLARHI AALANHGGGY LIFGVDDKTR 
KPLGKTEFNL DLFSQDAITG IIKKYLDPRI QVLVEHVVLE GTTYPVVVIP PHGARPVFAI
ADGPQDDRNR PVGVT