| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2068 |
|---|
| Symbol | |
|---|
| ID | 3675483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2258767 |
|---|
| End bp | 2262411 |
|---|
| Gene Length | 3645 bp |
|---|
| Protein Length | 1214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637713634 |
|---|
| Product | nitrate reductase, alpha subunit |
|---|
| Protein accession | YP_318678 |
|---|
| Protein GI | 75676257 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG5013] Nitrate reductase alpha subunit |
|---|
| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGA TACTTGACCT CGTTAATCCC CGGGAGCGCA AGTGGGAAGA GTTCTACCGT
AATCGCTGGT CCCACGATAA CGTCTTCCGC AGTACGCACG GCGTGAACTG CACCGGCGGT
TGCTCCTGGG CGATCTACGT CAAGGACGGC ATCATCACAT GGGAGATGCA GCAGACCGAC
TATCCGCTGC TTGAGCGCAG CCTGCCGCCC TATGAGCCGC GTGGCTGCCA GCGAGGCATC
TCCGCTTCGT GGTACGTCTA CAGCCCGATC CGCGTGAAGT ATCCGTACAT TCGTGGTCCT
CTCGCCGACC TCTGGCATGA AGCCAAGGCG TCGTATCCCG ATCCCGTGCA GGCCTGGGCG
TCGCTGGTCG AAGATGAAGA GAAGCGGAAT CGTATCCAGA AGGCGCGCGG CAAAGGTGGC
TTCCGCCGTG CCAAGTGGGA AGAGCTGATC GAACTGATCG CGGCGTCCTG TTTATATACT
GCGCGCAAGC ACGGACCGGA CCGGGTGATG GGCTTCTCTC CCATTCCGGC GATGTCGATG
CTGTCATTCG CGGCTGGTAC ACGCTTTCTG TCGCTCTTCG GCGGCGGCTT GATGAGCTTC
TACGACTGGT ACGCCGACCT GCCGACGTCG TTCCCGGAGA TCTGGGGCGA CCAGACCGAC
GTGTGCGAAA GCGCCGACTG GTACAATTCG AAGTTCATCG TCTCGATGGC GTCGAACATG
AACATGACGC GCACGCCCGA CGTGCACTTC ATCTCGGAAG CGCGCACCGA GGGCACCAAG
TTCGTGGTTC TCTCGCCGGA CTTCAGCCAG ATCGCGAAGT ACTGCGACGA GTGGATTCCG
ATCCAGGCGG GTCAGGACAC GGCTCTGTGG ATGGCGGCCA ACCACGTCAT TCTCAAGGAG
TACTACATCG ATCGTCAGGT GCCGTACTTC ATCGACTATG TGAAGCGCTA TACCGACCTT
CCGTTCCTTG TCGAGCTCGA GCCCAACGGC AACACCTACA AGACCGGCCG GCTGCTGCGG
TCCAATCGCG TCGCGCGTTA CAAGGACGTC GAGAACGGTG AGTGGAAGAT GTTGGTGCTC
GACACCGCCA CCGGCGAGCC GCGCGCGTTC AAGGGCCAGG TCGGCGATCG CTGGGGCTCC
ACGCACGGCA AGTGGAATCT GTCGGCGGAA GACACGCTCG ACAACAGCCC GATCGATCCG
GTGCTGAGCT TCATCGATCA GTCGGACGGC GTGGTGCAGG TCGGGTTCGA CGACTTCGTG
AACGGCAGCG TCGTTTCGCG CGGCGTTCCG GTGAAGCGCA TCGCGACCGA CAAGGGCGAG
GTTCTGGTCA CGACCGGCTT CGACATCATG ATGTCCCAGT TCGGTCACAG CCGCGGCCTG
GAAGGCTCGT TCGCGACCAG CTATGACGAT GAGGACGCGC CCTACACGCC GGCATGGCAG
GAGCGTCACA CCGGCATCGG CCGTGAGACC GCGATCAGGT TCGCGCGTGA ATTCGCGACC
AACGCCGAGC TCACCAACGG CAAGTCGATG GTGATCGTGG GCGCCAGCGC CAACCACTGG
TACTACAACA ACCTCTGCTA CCGGTCGGCG ACGGTCGCCC TGATCCTGTG CGGCTGCTGT
GGCGTCAACG GCGGCGGCAT CAACCACTAT GTCGGCCAGG AAAAGCTGGC GCCGGTTGCG
CCATGGTCCA CGGTTGCAAT GGCTCTGGAC TGGAACAAGC CGCCGCGCGT CGTGCAGTCG
TCGACCTGGC ACTATGCCCA TAGCTGTCAG TGGCGCTACG AGCAGGAGTT CACCGAGTAT
GGCCTGACGG CTCCGAACCC GCGGTGGGCC AAGGGTCATG CGATCGATCT CGAGGCGAAG
TCGGTTCGTT GTGGCTGGAT GCCGTTTACG CCAAACTTCC ATCGTAACCC GATCGAGGTC
GTGGCTGAGG CCGAACGTGC CGGCGCGAAG TCGACCGCCG ATATTGCGAC CTACGTCGCG
GATCAGGTCG CAAGCAAAAA ACTGGATCTG GCGATCAATG ATCCCGATGC CGAGGAGAAC
TGGCCGCGTG TGTGGTTTAT CTGGCGCGCA AACGCGATCC AGTCGAGCGC CAAGGGTCAT
GAGTTCTTCC TGCGCCATTA CCTCGGCGCA CATGACAATG TCATCGCTGA GGAGCGTGCC
AAAGGCAAGA CGACGACGGT CAAGTATCGA GACACGGCTC CTCAGGGGAA GTATGACCTC
GTTGTGGACA TCAACTTCCG CATGAACACG ACAGGGCTGT ACTCCGACAT CATCCTGCCG
ACCGCGTTCT GGTACGAGAA GAACGATCTC AACACGACGG ATCTGCACTC GTTCCTGCAC
GTGCTGGGGC AGGCGGTTCC GCCGGTTTGG GAGTCCAAGA CGGACTGGGA GATCTTCAAG
CTGATCGCGA AGAAGGTCAG CGAGCTGTCT CCGCTGGCGT TCTCCAAGCC GGTGCGTGAC
ATAGTGCTTC AGCCGCTGAT GCACGACACC CCTGACGAAC TCGCTCAGCC CGAGATTCTT
GACTGGGCCG AAGGCGAGTG CAAGCTGGTG CCGGGCAAGT CCTTCCCGCA TGTGCGGGTG
GTCGAACGCG ACTATGCGAA CTTGTATAAC AAGTTCATTT CGTTCGGACC AAAGGCGCGT
GAAGACGGCA TCTCAGCGGT CGGCGTGAAC ATTCCGATCA AGAAGCAGTA CGACCAGATG
CTGGAAAATC CGATCATGCC GATGCCGGAT TCGAGGCATA TGCGGTGTGT GGAGTGGGGC
GGCAAGCGTT ACCCGAGCCT CGAGGATGTT CTCGACGCGT GCAACGTTGT TCTGTTGTGT
GCGCCTGTGG CGAATGGTGA GGTCAGCTAT CAGGGCTTCG TCAACGAGGA GCAGCATGTC
GGACTTCCGC TTGCCGATAT TGCCGAACCG ACGCGAGGCG TCTCGTCGAC ATTCTACGAT
CTGACGCGTC AACCGCGCCG GATCCTGACG AGCCCCTGCT GGACGGGCCT GGTCAACGAC
GGTCGTGCAT ATTCCGCCTG GTGTATGAAT ATTGAACGCC TGGTGCCGTG GCGTACGCTG
ACGGGCCGGC AGTCGCTGTA TCTTGATCAT CAGTGGTATC TGGACTTCGG CGAGCACATC
CCGACCTACA AGCCGCGCCT CAACCCGCGC AAGACCGGCG ACATCGTGAA GAGCCGGGTG
GATGACCGCT CGCTGGTGCT GAACTACATC ACGCCGCATG GCAAGTGGAA CATTCACTCC
ACCTATAAAG ACAACCATCG GCTGCTGATG CTGTCTCGCG GCATGGATCC GGTGTGGATC
AATGACCGGG ATGCGGAAAA GGTCGGTATC GAGGATAACG ACTGGGTCGA AGTCTACAAC
GACAACGGCG TGGTCGTGAC CCGAGCCAAC GTCAGCCGTC GAATCCAGCC TGGCACCTGC
ATGTATTACC ACGCGGTCGA GCGCACGGTG TACATTCCGA AGTCCCAGGA ACGGAAGTGG
CGTGGCGGAG GGCACAACAG TCTGACGCGT ATTCGTATCA ATCCGTTGTT CCTGGCAGGC
GGCTATGCCC AGTTCACCTA TGGATGGAAT TACTGGGGAC CGACCGGCAT CTTCACACGC
GACACCCATG TCGTCGTGCG CAAGATGGAG AAGGTGGAAT GGTAG
|
|---|
| Protein sequence | MSWILDLVNP RERKWEEFYR NRWSHDNVFR STHGVNCTGG CSWAIYVKDG IITWEMQQTD
YPLLERSLPP YEPRGCQRGI SASWYVYSPI RVKYPYIRGP LADLWHEAKA SYPDPVQAWA
SLVEDEEKRN RIQKARGKGG FRRAKWEELI ELIAASCLYT ARKHGPDRVM GFSPIPAMSM
LSFAAGTRFL SLFGGGLMSF YDWYADLPTS FPEIWGDQTD VCESADWYNS KFIVSMASNM
NMTRTPDVHF ISEARTEGTK FVVLSPDFSQ IAKYCDEWIP IQAGQDTALW MAANHVILKE
YYIDRQVPYF IDYVKRYTDL PFLVELEPNG NTYKTGRLLR SNRVARYKDV ENGEWKMLVL
DTATGEPRAF KGQVGDRWGS THGKWNLSAE DTLDNSPIDP VLSFIDQSDG VVQVGFDDFV
NGSVVSRGVP VKRIATDKGE VLVTTGFDIM MSQFGHSRGL EGSFATSYDD EDAPYTPAWQ
ERHTGIGRET AIRFAREFAT NAELTNGKSM VIVGASANHW YYNNLCYRSA TVALILCGCC
GVNGGGINHY VGQEKLAPVA PWSTVAMALD WNKPPRVVQS STWHYAHSCQ WRYEQEFTEY
GLTAPNPRWA KGHAIDLEAK SVRCGWMPFT PNFHRNPIEV VAEAERAGAK STADIATYVA
DQVASKKLDL AINDPDAEEN WPRVWFIWRA NAIQSSAKGH EFFLRHYLGA HDNVIAEERA
KGKTTTVKYR DTAPQGKYDL VVDINFRMNT TGLYSDIILP TAFWYEKNDL NTTDLHSFLH
VLGQAVPPVW ESKTDWEIFK LIAKKVSELS PLAFSKPVRD IVLQPLMHDT PDELAQPEIL
DWAEGECKLV PGKSFPHVRV VERDYANLYN KFISFGPKAR EDGISAVGVN IPIKKQYDQM
LENPIMPMPD SRHMRCVEWG GKRYPSLEDV LDACNVVLLC APVANGEVSY QGFVNEEQHV
GLPLADIAEP TRGVSSTFYD LTRQPRRILT SPCWTGLVND GRAYSAWCMN IERLVPWRTL
TGRQSLYLDH QWYLDFGEHI PTYKPRLNPR KTGDIVKSRV DDRSLVLNYI TPHGKWNIHS
TYKDNHRLLM LSRGMDPVWI NDRDAEKVGI EDNDWVEVYN DNGVVVTRAN VSRRIQPGTC
MYYHAVERTV YIPKSQERKW RGGGHNSLTR IRINPLFLAG GYAQFTYGWN YWGPTGIFTR
DTHVVVRKME KVEW
|
|---|
| |