Gene Nwi_2053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2053 
Symbol 
ID3675832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2241933 
End bp2242703 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content63% 
IMG OID637713616 
ProductTonB like protein 
Protein accessionYP_318663 
Protein GI75676242 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGCG GTTGGATGCT TCGCTTTATT GCGCGGAGAA TCCCGACCTG TATCGCACTC 
GCGGCGCATA CCGCCGTCGT GTTCACGCTG GTTTACGATC CGGCGATCAA GCTGGTCATT
GACGAACAGC CCGGTCCGAC GTTTGTCGAG ATCGTCACTG TCCCTCCCCA CGGCTCAACC
GCCGCCAAGC AGGATGAAGC TGCCGAACCG GCATCAACGG CGCCGGCCGA GTTACCCCTG
CCGGCGCTCG CGGAGGAATC TCCGCCGGAG ATTTCCGATC GGGGAGAAGA GACAGAAAAG
CCGGTTACAT TGCCGGTGCC GAACCCGAAG CGGGCGGCCG TTCCCAAGAG GAGCGCGCCT
CGCGTTCGGC TGGCCGCGAG ATCCGCGCCG CCTCGCACCA GCGAGCAGCT TACCGACGCG
GCCGGCACGC CCGAACAGCT GGAGGGTGGA GCAACAGGAA CGACCGATAT CAGTCAGGTG
CCTGTCGATG TTCTGTCCGC CTGGAAAGCG AGACTGCTTT CCCACCTGGA GCGCTACAAA
CGCTATCCGA GCGCGGCCCG CAAGAAGGGC ACCGAAGGTA CGGCCTATCT GAGCTTCGGC
ATGGATAGCG AGGGCCGGGT ACTCGGATAT CATCTGGCGC GATCTTCAGG TTCTTCCGAA
CTCGATGAGG AAGTTCTGGC GATGATCGTG CGCGCATCGC CGTTGCCTCC CGCGCCACCG
GAAATGAACA CGCAGGTGAA GCTCATTGTT CCCATCCGGT TCAGGATGTG A
 
Protein sequence
MQGGWMLRFI ARRIPTCIAL AAHTAVVFTL VYDPAIKLVI DEQPGPTFVE IVTVPPHGST 
AAKQDEAAEP ASTAPAELPL PALAEESPPE ISDRGEETEK PVTLPVPNPK RAAVPKRSAP
RVRLAARSAP PRTSEQLTDA AGTPEQLEGG ATGTTDISQV PVDVLSAWKA RLLSHLERYK
RYPSAARKKG TEGTAYLSFG MDSEGRVLGY HLARSSGSSE LDEEVLAMIV RASPLPPAPP
EMNTQVKLIV PIRFRM