Gene Nwi_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2050 
Symbol 
ID3675829 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2239519 
End bp2240508 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content68% 
IMG OID637713613 
ProductFecR, iron siderophore sensor protein 
Protein accessionYP_318660 
Protein GI75676239 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACGCGGC CTGCGGTGGA GTGGCTGGTT GCGATGACGC CGAAAGACAG GCAGCAGCAT 
GAATCCGACA TCGCGCTGAG CGACGCGGCG ATCGACTGGC TCGTCAGGCT CAAGTCCGGG
CAGGCGACGA ACGACGATCA TGCCGCCTTC GCGGCATGGC GCGGGCAGAG CATGGAGCAT
GAACTGGCCG CGCGCGAGGC CGAAGCCGTC TGGCATGGCG TCGGCGTCGC GGGCGACCGC
GCCCGGACCC TGGAGCGAAA GGAACGCCGC GCCAAGGTGA CGCGACGCGC CGTGCTGGGC
GGGGGAACGC TGGCGGTAGC CGGCTTCGTC TTGGCGGGAT CCGGCGTCAT CGGGCCGCGA
GCGTTTGCCG ACCACGTCAC CGGGGTCGGA GAACAACGCA CCGTCGGTCT CGCGGACGGC
TCATCCGTAT TCCTCAACGC CAGTTCGGGG TTTTCCGTCA AGTTCAGCGC TCACGAGCGC
CGGTTGTCGC TGCTCGAAGG CCAGGCCACC TTCACGGTCG CGCACGATAC GGCGCGGCCC
TTTATTGTCG AGGCGGGAGA CGGGCAGACC CGTGCTGTCG GGACGGTTTT CGACATCGAT
ATCCGCGCCG GCGAGGTGGT GGTGACGGTC GTGGAGGGCG TCGTCGCGAT CACGACCGAT
CAGTCGCCCG ATCCGGTTGT CGCGCGGGTG GACCAGCGCG TCCGCTATCT CCCGCGCGGC
AGGCCCTCGG GGCCGGAATC CGCCGACGCC TATATTGAAA CGGCGTGGCG CCGCGGCAAG
CTGATCTTCA ATCGCCGCCC GCTGGCCGAT GTGGTGGCCG ACATCGAGCG CTACCGCCGC
GGACGGATCG TCCTGATGGG AGACGGGCTG CGGTCGCTGG AGGTGACCGG CGTGTTCGAT
CTCAACGATC CGGAGGCGAT CCTGCACACG ATCGAGGACA CGCTGCCGGT GCAGATGACG
CGTCTGCCGT TCGTCACCAT CGTTCGGTAG
 
Protein sequence
MTRPAVEWLV AMTPKDRQQH ESDIALSDAA IDWLVRLKSG QATNDDHAAF AAWRGQSMEH 
ELAAREAEAV WHGVGVAGDR ARTLERKERR AKVTRRAVLG GGTLAVAGFV LAGSGVIGPR
AFADHVTGVG EQRTVGLADG SSVFLNASSG FSVKFSAHER RLSLLEGQAT FTVAHDTARP
FIVEAGDGQT RAVGTVFDID IRAGEVVVTV VEGVVAITTD QSPDPVVARV DQRVRYLPRG
RPSGPESADA YIETAWRRGK LIFNRRPLAD VVADIERYRR GRIVLMGDGL RSLEVTGVFD
LNDPEAILHT IEDTLPVQMT RLPFVTIVR