| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_2042 |
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| Symbol | |
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| ID | 3675821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2232242 |
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| End bp | 2233486 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637713606 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_318653 |
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| Protein GI | 75676232 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.617858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGACCA TGAACGCTCC GGTGCCTCCC GACGATGTCG ACGGCCTGGC GCTGCCGCCG
GCCTGGACCG CGCCGGCGCG TCGCGCGCGC GGCTCCCGGC GGCTTGTCCT GGGGTTGAGC
GCCGCGGGAC TGGCTGCGCT CGGCACTTTT GCCGTCATGG GATTCCGCGC GCCGTCACCG
GACAGCCTTT ATGAGACCGT CGCCGTCACG CGGCAGGACA TCGAGAGCAC GGTGGCCGCG
ACCGGCAAGA TCCAGCCCTA TGCGAGCGTC GATGTCGGCG CGCAGGTGAC CGGCCAGTTG
AAGCATCTGC GCGTCGCCGT CGGCGACAAG GTGACCGCGG GACGGGTCGT GGCGGAGATC
GACGCCGAAG TGCAGTCGGC GAAAGTCGAG GGAATCGAGG CCGATCTGGC GAGGCTGAGG
GCCGAACTGG CGGAGCAGGA AGCCGGGCTT GTGTTCGCGG AACGCAATGT CGAGCGGCAC
CAGACGCTGT CACAGACCAG CGCGGTGTCG AAACTCGCCT TTGAGACGAC GACGCGCGAC
CGCGACATCC TGATCGCGCG CATCGACGCC TCCAAGGCCC GCATCCGCCA GATGCAGGCC
GACCTGCGCG CGCAGAAAAC AGCGCTGAGG TTCGCCCGCA TCACCGCGCC GATGGGAGGC
ACCGTGGTCT CGGTGGACGC GAAGGAGGGG CAAACCCTCA ACGCCAACTA CGACACGCCG
CTGATCCTGC AGATCGCCGA TCTCGACACC ATGACGGTAT GGACCGATGT GTCGGAGGCC
GATGTCGTCA AGCTGCGCGA GGGCATGCCG CTGTGGTTCA CGACCTTGGG CCGGCCGGAT
CGCAAGTGGC ATGCGACGCT GCGGCAGATC CAGCCGGCGC CCCGGCGTCC CGACAACAAG
AAAGCCGAGA CCAAGACCAC GCCGCAATCC GGCAATGTCG TGCTCTACAC GGCGCTGTTC
GACGTTCCCA ACGCGGACGG CAGCTTGCGG GCGGGAATGA CCGCGCAGGT GTTCTTCGTG
ACCGCCGCGG CGCAGAACGC CCTGGTCGTT CCGGTTGCAT CGCTCAATGA CAAGGGAGAG
GTGCGCGTTC TCCGTGAAGA CGGGACCATC GCTGTCCGCA AGGTCGAGAT CGGCACCCGA
ACCCGCTTTC TGGTCGGAAT CACGAGCGGG GTGGCGGATG GCGAGCGCGT CATCACCGGC
CTCAAGTCGG CCGGTCCGCC CGCGAAGCTG AGGGTGGAGT CATGA
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| Protein sequence | MPTMNAPVPP DDVDGLALPP AWTAPARRAR GSRRLVLGLS AAGLAALGTF AVMGFRAPSP
DSLYETVAVT RQDIESTVAA TGKIQPYASV DVGAQVTGQL KHLRVAVGDK VTAGRVVAEI
DAEVQSAKVE GIEADLARLR AELAEQEAGL VFAERNVERH QTLSQTSAVS KLAFETTTRD
RDILIARIDA SKARIRQMQA DLRAQKTALR FARITAPMGG TVVSVDAKEG QTLNANYDTP
LILQIADLDT MTVWTDVSEA DVVKLREGMP LWFTTLGRPD RKWHATLRQI QPAPRRPDNK
KAETKTTPQS GNVVLYTALF DVPNADGSLR AGMTAQVFFV TAAAQNALVV PVASLNDKGE
VRVLREDGTI AVRKVEIGTR TRFLVGITSG VADGERVITG LKSAGPPAKL RVES
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