Gene Nwi_2027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2027 
Symbol 
ID3677097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2218049 
End bp2219668 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content63% 
IMG OID637713591 
Productpeptide chain release factor 3 
Protein accessionYP_318638 
Protein GI75676217 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG4108] Peptide chain release factor RF-3 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGACC TCGCCTTAAA GACCGAATCG ACACCTGCCT CGCCGCTGGC GGCGGAAGTC 
GCGCGCCGGC GCACCTTCGC GATTATCTCG CACCCGGACG CCGGCAAGAC CACGCTGACG
GAAAAGCTCT TGCTGTTCGG CGGCGCCATC AACCTCGCCG GACAGGTCAA GGCGAAGGGG
GAGCGACGCA ATACCCGGTC GGACTGGATG AAGATCGAGC GTGACCGCGG CATCTCGGTG
GTCACGTCGG TGATGACCTT CGAGTTCGAC GGCCGGGTCT TCAATCTGCT GGATACGCCG
GGTCACGAGG ACTTTTCCGA GGACACCTAC CGCACCCTGA CCGCGGTGGA TTCCGCCGTC
ATGGTGATTG ACGCGGCCAA GGGCATCGAG GCCCGCACCC GGAAGCTGTT CGAGGTCTGC
CGCCTGCGCG ATATCCCGAT CGTCACCTTC ATCAACAAGA TGGACCGGGA GAGTCGCGAT
ACCTTCGAAC TGCTGGACGA GATCGAAAAA ACGCTGGCGC TCGATACCAC TCCAATGACC
TGGCCGGTCG GGCGCGGCCG CGATTTTCTC GGCACCTACG ATATCGCGAC CGGCGGCATC
CGCCTGCTCG AAGGCGGCGG CGCCAAGACC GGCGCGGCTG AACGGATCGA CATCGCCGAT
CTCGCCGCGC GAAACGCCAA CCTGAATGTC GATGAAATCA GGGAGGAGCT GGCGCTGGCC
ACCGAGGCCT GCAAGCCGTT CGAACTTGAG GCATTTCGCG AGGGGCATCT GACGCCGGTC
TACTTCGGCT CGGCCTTGCG CAATTTCGGC GTGGGCGACC TTCTGGAGGG TCTCGGAAAC
TTCGCGCCTC CGCCGCGCGC GCAGGAGTCC AATCTGCGCA AGGTCGAGGC CGACGAGCCG
CGCATGACCG CCTTCGTGTT CAAGATCCAG GCGAACATGG ATCCCAACCA CCGCGACCGC
ATCGCTTTCG CGCGCCTGTG TTCCGGCAAG CTGACGCGCG GCATGAAGGC GAAGCTGGTG
CGTACCGGCA AGCCGATGCC GCTGTCCTCG CCGCAGTTCT TTTTCGCGCA GGATCGCGCC
ATCGCGGACG AGGCGTTCGC CGGCGACGTG GTTGGCATTC CCAATCACGG CACCTTGCGG
ATCGGCGACA CCCTGACCGA AGGTGAGGAT GTCACTTTCG TCGGAGTGCC CTCGTTCGCG
CCGGAAATCG TCCGCCGCGT GCGGCTGACC GATGCGATGA AGGCGAAGAA GCTGAAGGAA
GCTTTGCAGC AGATGTCGGA GGAGGGCGTT GTGCAGGTCT TCCGCCCGCG CGACGGAGCG
CCCGCGCTGG TCGGCGTCGT CGGGATGTTG CAGCTCGACG TACTGAAGGC GCGCCTCGAT
GCCGAATATT CGCTGCCGGT GGATTTCGAG GTCTGCGAGT TTCAGCTCGC GCGCTGGATT
TCATCAGACG ACCGCAAGAA GCTCGATGTC TTCATTGCCG CCAACGGCTC CGGCGTTGCG
GATGATGTCG ACGGCGATCC GGTGTTCTTG GCGAAGAATG AATTCTATCT TGGCTACACG
CGAGAGCGCG CCGAAGGCAT CGTTTTTTCC AGCGTCAAGG ACGTGAAGAA GACGTCATGA
 
Protein sequence
MPDLALKTES TPASPLAAEV ARRRTFAIIS HPDAGKTTLT EKLLLFGGAI NLAGQVKAKG 
ERRNTRSDWM KIERDRGISV VTSVMTFEFD GRVFNLLDTP GHEDFSEDTY RTLTAVDSAV
MVIDAAKGIE ARTRKLFEVC RLRDIPIVTF INKMDRESRD TFELLDEIEK TLALDTTPMT
WPVGRGRDFL GTYDIATGGI RLLEGGGAKT GAAERIDIAD LAARNANLNV DEIREELALA
TEACKPFELE AFREGHLTPV YFGSALRNFG VGDLLEGLGN FAPPPRAQES NLRKVEADEP
RMTAFVFKIQ ANMDPNHRDR IAFARLCSGK LTRGMKAKLV RTGKPMPLSS PQFFFAQDRA
IADEAFAGDV VGIPNHGTLR IGDTLTEGED VTFVGVPSFA PEIVRRVRLT DAMKAKKLKE
ALQQMSEEGV VQVFRPRDGA PALVGVVGML QLDVLKARLD AEYSLPVDFE VCEFQLARWI
SSDDRKKLDV FIAANGSGVA DDVDGDPVFL AKNEFYLGYT RERAEGIVFS SVKDVKKTS