Gene Nwi_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_2014 
Symbol 
ID3674202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2204009 
End bp2205196 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content65% 
IMG OID637713578 
Productalanine racemase region 
Protein accessionYP_318625 
Protein GI75676204 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.109646 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.427468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTCG TGCCCGATTC TAAAGTGAGC GGCGAGCCGG CCGATGCCGG CGCGGCTATT 
GCGGCAGCCG CGGCAATCGG CACCCTCACG GTCGATCTCG ACGCTATCGT CGCCAACTGG
CGCAAGCTGG AAAAAACCGC CGTGCCCGCC GAGTGCGCGG GGGTGATCAA GGCTGACGCT
TACGGCTGTG GCGCCCGGCC CGTGGCGCGC GCGCTGAGCG CCGCCGGATG CAGGACGTTT
TTTGTCGCCA CGCTCGATGA GGCGCGGGTG GTTCGCGCCG CCGCTTCCAC CGCCGACATC
TATGTACTGG ACGGATTCTT TCAGAATTGC GGTGACGCCT TCGCGACAAT CAATTGCCGG
CCCGTGATCG GCGATCTCAA TGAACTTGCG GAATGGGACG TATTTTGCCG GCGCACCGGC
TGGGCGGGTG GCGCGGCCAT CCACATCGAC ACCGGAATGA ACCGCCTGGG TCTCACCCTG
GATGAGGCGC AAGGCATCCT TCCAAGGATC AATGCCGGCG ATCATGGTGT CACGCTGGTG
ATGAGTCACC TGGCCTGCGC GGAAAGCCTC CACCATCCGC TCAACGCTAG TCAGGTCGCG
GCGTTTCGGG AGATCGCCAG GCAGTTTTCC GGGGTTCCGG CCTCATTGGC GAACTCGTCC
GGCATTTTTC TCGGGGCCCA GTATCAGTTC GACCTGGTGC GTCCGGGCGC CGCGCTCTAT
GGCGTCAACC CCACGCCGGA AGCCGCCAAT CCGATGCAGC CGGTCATCGA ATTGAAGGCA
CGGATCATCC AGACCCGCTC GATCGACAGA GGCGAAAGCG TCGGCTACGG CGCGACCTGG
ACCGCGCGGC GGCCGACGCG GCTTGCCGTC GTCTCGGCGG GATACGCCGA CGGCTATTTC
CGCGCCGGCG GTAGCAATGA CGGCACGCGC GGAGCCGAGG TCGTTGTCGC CGGAACGCGA
TGCCCGGTGG CGGGCCGAAT TTCCATGGAC CTGCTGGCGG TCGACATCAC CGACCTGCCG
GCCCATGCCG GAGTCCGGCG TGGTCATCTG GCGACGCTGA TCGGCGAGGG CATCACCGTG
GACGAACTTG CCCACCATTT CGGCACCATT GGTTACGAGG TACTCACCAG CCTCGGCGGC
CGCTACCACC GGATCTATAA AGGCGGCCCG GCCGAGCCTC GAACCTGA
 
Protein sequence
MNLVPDSKVS GEPADAGAAI AAAAAIGTLT VDLDAIVANW RKLEKTAVPA ECAGVIKADA 
YGCGARPVAR ALSAAGCRTF FVATLDEARV VRAAASTADI YVLDGFFQNC GDAFATINCR
PVIGDLNELA EWDVFCRRTG WAGGAAIHID TGMNRLGLTL DEAQGILPRI NAGDHGVTLV
MSHLACAESL HHPLNASQVA AFREIARQFS GVPASLANSS GIFLGAQYQF DLVRPGAALY
GVNPTPEAAN PMQPVIELKA RIIQTRSIDR GESVGYGATW TARRPTRLAV VSAGYADGYF
RAGGSNDGTR GAEVVVAGTR CPVAGRISMD LLAVDITDLP AHAGVRRGHL ATLIGEGITV
DELAHHFGTI GYEVLTSLGG RYHRIYKGGP AEPRT