Gene Nwi_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1980 
Symbol 
ID3674244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2167218 
End bp2167559 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content69% 
IMG OID637713544 
Productcarboxysome structural peptide CsoS1B 
Protein accessionYP_318591 
Protein GI75676170 
COG category[C] Energy production and conversion
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG4577] Carbon dioxide concentrating mechanism/carboxysome shell protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAC ACGTCAACGG CATCGCCCTG GGCATGATCG AAACTCGCGG GCTGGTTCCG 
GCGATCGAAG CGGCCGACGC GATGACCAAG GCTTCCGAAG TGCGGCTGAT CGGTCGGCAG
TTCGTCGGTG GTGGTTACGT CACGGTGTTG GTGCGCGGCG AAACCGGCGC GGTCAACGCG
GCGGTGCGTG CCGGGGCTGA CGCCTGCGAG CGCGTGGGCG ACGGCCTGGT GGCCGCGCAC
ATCATCGCGC GCGTGCACAG CGAGGTTGAG GGCATCCTGC CGACGAAGCC TGACTCGAAC
GGCGGCGGCC GCGACGCCGA GACCACCTCC ACCCGCAGCT GA
 
Protein sequence
MATHVNGIAL GMIETRGLVP AIEAADAMTK ASEVRLIGRQ FVGGGYVTVL VRGETGAVNA 
AVRAGADACE RVGDGLVAAH IIARVHSEVE GILPTKPDSN GGGRDAETTS TRS