Gene Nwi_1923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1923 
Symbol 
ID3676778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2109512 
End bp2109904 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content60% 
IMG OID637713487 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_318535 
Protein GI75676114 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.457786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCGCG TCACCGTAGA AGATTGCATT GATAAGGTCG ACAACCGGTT TGACCTGGTT 
CTTTTGGCCG CACATCGCGC CCGGATGATT TCGTCGGGTT CGCAGCTGAC GATCGACCGC
GATAACGACA AGAATCCCGT CGTTGCGCTT CGCGAGATCG CCGAGCAGAC CATCTCCCCG
GAGGATATGC GCGAAGAGCT GGTTCATTCC TTGCAGAAGT TTGTCGAGGT CGACGAGCCC
GAGTCCGACA CCGTGCCCTT GATCGGTTCG GCCGGGGCAA GCGTCGATGC GGACGATACC
GAGGTCGCGG TCGAGCGCAT GACCGAGGAA GAACTGTTGA AGGGCCTGGA GGGGCTGGCG
CCTCCCGAGG AACAGCCCGA AGAGGATGAA TGA
 
Protein sequence
MARVTVEDCI DKVDNRFDLV LLAAHRARMI SSGSQLTIDR DNDKNPVVAL REIAEQTISP 
EDMREELVHS LQKFVEVDEP ESDTVPLIGS AGASVDADDT EVAVERMTEE ELLKGLEGLA
PPEEQPEEDE