Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1922 |
Symbol | |
ID | 3676777 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2106787 |
End bp | 2109111 |
Gene Length | 2325 bp |
Protein Length | 774 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637713486 |
Product | RelA/SpoT protein |
Protein accession | YP_318534 |
Protein GI | 75676113 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.604164 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGGGCG GTTTCCGCGC GATGAAGACA CTCGGTTCGA TGACAGGCTG GCCTGGCAAA AGGCGGCAGA TGGAGGCCGC GACCGATCCG GTCGTGACGG CGCCGCCGCC GGCTGCTCCT GTCAAGCCGA CGCGCCCGCG TATGATGCGT CAATACGACC TGGTCGAACG CGTGCGCTCC TACAACCCCG ACACCAACGA GGATATGCTC AACCGGGCGT ACGTCTATGC CATGAAAGCT CATGGCGAAC AGATACGGGC GTCGGGCGAT CCCTATTTCT CTCATCCGCT TGAAGTGGCG GCCATCCTGA CCGGTCTCAA GCTCGACGAC GCCACCATCG TCGCGGCGCT GCTGCACGAC ACCATTGAGG ACACCGAGGC CACCCGCGCC GAGATCGACA ACATGTTCGG GCCGGAGATC GGCGCGCTGG TCGAGGGCCT GACCAAGCTG AAGCGGCTGG AACTGGTCTC GCGCGAGGCC AAGCAGGCCG AAAATCTGCG CAAGCTGCTG CTGGCGATTG CCGATGATGT CCGCGTGCTG CTGGTCAAGC TGGCGGATCG GCTGCACAAC ATGCGCACGC TGGAGTTCGT GCCGCCGGCG TCGCGTCAGC GCATCGCCGA GGAAACCCTC GACATCTACG CGCCGCTCGC GGGCCGCATG GGCATGCAGG AAATGCGCGA GGAGCTTGAG GATCTGGCGT TCCAGACCCT CGATCCGGAA GCCCACGGGG TGGTGGCGCA GCGGCTCGAC GCGCTGGCCG AGCGTAACCG CAACCTGATC GGTGAGATCG AAAGCCAGCT CACGACCAGT CTCGCCAACA AGGGTATCGC CGCGCGCGTA GCCGGCCGCC GCAAACAGCC GTTTTCGATC TGGACCAAGA TGGAACGAAA ATCGGTCGGT TTCGAGCAGC TTTCCGATAT TTTCGGATTT CGCGTCGTGG TGCCCGATGT CGAAGCCTGT TATCGCGCCC TCGGGGTGGT CCACATGACG TGGCCGGTCG TGCCGGGCCG TTTCAAGGAC TATATCTCGA CGCCGAAGCA GAATGACTAT CGCTCGATCC ACACCACGGT GATCGGACCG GGCAATCAGC GCGTGGAATT GCAACTCCGG ACCGAGGAGA TGGATCGCAT CGCGGAGCAC GGCATCGCCG CCCATGCCTT TTACAAGGAC GGGGCGGGCT CGCCGACGGA ATTGCTCAAT CGGGAATCCA ATGCGTTCGC CTGGCTGCGT CATACCATCG AAGTGCTGTC GGAAAGCGCC AATCCGGAGG AGTTCCTCGA ACACACCAAG CTCGAACTGT TTCACGATCA GGTCTTCTGC TTCACGCCGA AGGGGAAGCT GATCGCGCTG CCGCGGCACG CCAATGTCAT CGACTTCGCT TATGCCGTGC ATACCGACGT CGGCAACAGC ACGGTGGGTT GCAAGATCAA CGGCAAGTTT GCGCCGCTGT CGTCACGATT GCAGAATGGA GACGAGGTCG AGGTTCTGAC GTCGGCCGCC CAGTCAGCGC CGCCCTCCGC CTGGGAATCG CTCGCCGTCA CCGGCAAGGC GCGGGCGGCG ATCCGGCGCG CCACGCGAGC CGCCGTGCGC GGTCAGTATG TCAGCCTTGG CCGGCGGATC GTTGAGCGCC TGTTCATCCG CGCTAAGATC GAATACGCCG ACGACAAGCT TACCGGCGCG TTGCCCCGGC TGGCGCGGGC CACGATCGAG GACGTCATGG CTTCGGTGGG GCGGGGCGAG ATGCGCGCCG CCGATGTCGC GCGCGCGATG TACCCGGACT ACAAGGAGGA GCGGGTTGGC GGCCCGGGCG TCAAGAAGAG CCTGACGGCG AAACTCAAAC TGAAAACGCC GCTGGATCCC GCTCGCAGCC CGTCGGTGAT TCCGATAGGC GGCATCAATT CGGACCTGCC GATCAAATTC GCGCCCAATG GCGGCGCGGT GCCCGGCGAC CGTATCGTCG GCATCGTCAC TCCCGGTGAA GGCATCACGA TCTATCCGAT TCAATCGCCG GCGTTGACGG ATTTCGAGGA AGAGCCCGAG CGCTGGCTCG ACGTTCGTTG GGATGTCGAT GACACGACGC CGCAGCGATT CCCCGCGCGC ATCGTGCTGG ATAGCCTCAA CGAGCCCGGC AGCCTCGCAC AGGTCGCGAC CGTGATCGCC GAGCACGACG GCAATATCGA CAATATCAGC ATGACCAGGC GTTCGCCCGA CTTCACCGAA ATGACCATCG ATCTCGAAGT GTATGACCTC AAGCATCTCA GCGCCATCAT CGCCCAGTTG CGCGCCAAGG ACGTCGTGGC GCGGATCGAG CGGGTCAACG GCTAA
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Protein sequence | MKGGFRAMKT LGSMTGWPGK RRQMEAATDP VVTAPPPAAP VKPTRPRMMR QYDLVERVRS YNPDTNEDML NRAYVYAMKA HGEQIRASGD PYFSHPLEVA AILTGLKLDD ATIVAALLHD TIEDTEATRA EIDNMFGPEI GALVEGLTKL KRLELVSREA KQAENLRKLL LAIADDVRVL LVKLADRLHN MRTLEFVPPA SRQRIAEETL DIYAPLAGRM GMQEMREELE DLAFQTLDPE AHGVVAQRLD ALAERNRNLI GEIESQLTTS LANKGIAARV AGRRKQPFSI WTKMERKSVG FEQLSDIFGF RVVVPDVEAC YRALGVVHMT WPVVPGRFKD YISTPKQNDY RSIHTTVIGP GNQRVELQLR TEEMDRIAEH GIAAHAFYKD GAGSPTELLN RESNAFAWLR HTIEVLSESA NPEEFLEHTK LELFHDQVFC FTPKGKLIAL PRHANVIDFA YAVHTDVGNS TVGCKINGKF APLSSRLQNG DEVEVLTSAA QSAPPSAWES LAVTGKARAA IRRATRAAVR GQYVSLGRRI VERLFIRAKI EYADDKLTGA LPRLARATIE DVMASVGRGE MRAADVARAM YPDYKEERVG GPGVKKSLTA KLKLKTPLDP ARSPSVIPIG GINSDLPIKF APNGGAVPGD RIVGIVTPGE GITIYPIQSP ALTDFEEEPE RWLDVRWDVD DTTPQRFPAR IVLDSLNEPG SLAQVATVIA EHDGNIDNIS MTRRSPDFTE MTIDLEVYDL KHLSAIIAQL RAKDVVARIE RVNG
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