Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nwi_1918 |
Symbol | |
ID | 3675901 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter winogradskyi Nb-255 |
Kingdom | Bacteria |
Replicon accession | NC_007406 |
Strand | - |
Start bp | 2103541 |
End bp | 2104341 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637713482 |
Product | ribonuclease III |
Protein accession | YP_318530 |
Protein GI | 75676109 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.669421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGGATG AATCGGCTGA CATTAAGCCC GTTCCGACCT CCGAAGACGT AGCCGCGCCG TCGGGCACGG AGCCGGTGGC GCCTGCCCCG AAGAAGAAGC GCGCCCGGAC CAGCACCAAG GCGATCATGG CCGCGATCGA ACAGCGGCTC GGCCATACGT TCGCTGATAT CTCGCTGCTG ACGACGGCTT TCACCCATGT CTCGGCGCTG AAGTCGTCGC GCGGACGCTG CGATAGCTAT CAGCGCCTCG AATTTCTCGG CGATCATGTG CTTGGTCTCG TGGTCTCCGA CATGCTCTAC CGCGCCTTTC CCAAGGCGGA CGAGGGCGAG TTGTCGAAGC GCCTGGCCGA TCTCGTGCGC AAGGAGACAT GTATCGATGT CGCCAAGTCG CTCGATCTAC AAGAGGGCGT CAAGCTCGGC GCGGTCGGCG CCGGCGCGGG AGCGCGGCTG CGCCGGTCCG TGCTCGGCGA TATCTGCGAG GCGGTCATTG GCGCGGTCTA TCTCGATGGC GGCTATGCGG CGGCCGCCGC CTTCGTCGAG CGCAACTGGC TCGAGCGGAT GCGCAAGCCG GTGCGGCCGC TGCGCGACCC CAAGACCGTG CTGCAGGAGT GGGCGCAGGG CAAGGGGCTG CCGACGCCGG TTTACCGCGA AGTGGAGCGT ACCGGGCCGC ATCACGACCC GCGCTTCCGC GTTGCGGTCG AATTGCCGGG GCTGGAGTCC TCGGAAGGTA TCGGCGGCAG CAAGCGCGCG GCCGAGAAGG CCGCCGCATC CGCCATGATC GTTCGCGAAG GTGTCAAGTG A
|
Protein sequence | MMDESADIKP VPTSEDVAAP SGTEPVAPAP KKKRARTSTK AIMAAIEQRL GHTFADISLL TTAFTHVSAL KSSRGRCDSY QRLEFLGDHV LGLVVSDMLY RAFPKADEGE LSKRLADLVR KETCIDVAKS LDLQEGVKLG AVGAGAGARL RRSVLGDICE AVIGAVYLDG GYAAAAAFVE RNWLERMRKP VRPLRDPKTV LQEWAQGKGL PTPVYREVER TGPHHDPRFR VAVELPGLES SEGIGGSKRA AEKAAASAMI VREGVK
|
| |