Gene Nwi_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1918 
Symbol 
ID3675901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2103541 
End bp2104341 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content67% 
IMG OID637713482 
Productribonuclease III 
Protein accessionYP_318530 
Protein GI75676109 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.669421 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGATG AATCGGCTGA CATTAAGCCC GTTCCGACCT CCGAAGACGT AGCCGCGCCG 
TCGGGCACGG AGCCGGTGGC GCCTGCCCCG AAGAAGAAGC GCGCCCGGAC CAGCACCAAG
GCGATCATGG CCGCGATCGA ACAGCGGCTC GGCCATACGT TCGCTGATAT CTCGCTGCTG
ACGACGGCTT TCACCCATGT CTCGGCGCTG AAGTCGTCGC GCGGACGCTG CGATAGCTAT
CAGCGCCTCG AATTTCTCGG CGATCATGTG CTTGGTCTCG TGGTCTCCGA CATGCTCTAC
CGCGCCTTTC CCAAGGCGGA CGAGGGCGAG TTGTCGAAGC GCCTGGCCGA TCTCGTGCGC
AAGGAGACAT GTATCGATGT CGCCAAGTCG CTCGATCTAC AAGAGGGCGT CAAGCTCGGC
GCGGTCGGCG CCGGCGCGGG AGCGCGGCTG CGCCGGTCCG TGCTCGGCGA TATCTGCGAG
GCGGTCATTG GCGCGGTCTA TCTCGATGGC GGCTATGCGG CGGCCGCCGC CTTCGTCGAG
CGCAACTGGC TCGAGCGGAT GCGCAAGCCG GTGCGGCCGC TGCGCGACCC CAAGACCGTG
CTGCAGGAGT GGGCGCAGGG CAAGGGGCTG CCGACGCCGG TTTACCGCGA AGTGGAGCGT
ACCGGGCCGC ATCACGACCC GCGCTTCCGC GTTGCGGTCG AATTGCCGGG GCTGGAGTCC
TCGGAAGGTA TCGGCGGCAG CAAGCGCGCG GCCGAGAAGG CCGCCGCATC CGCCATGATC
GTTCGCGAAG GTGTCAAGTG A
 
Protein sequence
MMDESADIKP VPTSEDVAAP SGTEPVAPAP KKKRARTSTK AIMAAIEQRL GHTFADISLL 
TTAFTHVSAL KSSRGRCDSY QRLEFLGDHV LGLVVSDMLY RAFPKADEGE LSKRLADLVR
KETCIDVAKS LDLQEGVKLG AVGAGAGARL RRSVLGDICE AVIGAVYLDG GYAAAAAFVE
RNWLERMRKP VRPLRDPKTV LQEWAQGKGL PTPVYREVER TGPHHDPRFR VAVELPGLES
SEGIGGSKRA AEKAAASAMI VREGVK