| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1898 |
|---|
| Symbol | clpX |
|---|
| ID | 3675448 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter winogradskyi Nb-255 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007406 |
|---|
| Strand | - |
|---|
| Start bp | 2081266 |
|---|
| End bp | 2082540 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637713461 |
|---|
| Product | ATP-dependent protease ATP-binding subunit ClpX |
|---|
| Protein accession | YP_318510 |
|---|
| Protein GI | 75676089 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1219] ATP-dependent protease Clp, ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00382] endopeptidase Clp ATP-binding regulatory subunit (clpX) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAGG TCGGTACGGG CGACTCCAAG AATACGCTGT ATTGTTCGTT CTGCGGCAAG
AGTCAGCACG AGGTTCGCAA ACTGATCGCG GGCCCGACCG TATTCATTTG TGACGAATGC
GTCGAACTCT GCATGGACAT CATTCGCGAG GAGAACAAGT CCTCGCTGGT GAAGTCGCGC
GACGGCATTC CGACGCCGAA GGAGATCTGC AAGGTCCTGG ACGATTACGT CATCGGGCAG
GGCCACGCCA AGAAGGTGCT TTCGGTCGCC GTCCACAATC ACTACAAGCG GCTAAATCAT
CAGACCAAGC ACAACGACGT CGAACTCGCG AAGTCGAACA TCCTACTGAT CGGTCCGACC
GGATCGGGCA AGACGCTGCT TGCGCAGACG CTCGCGCGCA TCCTCGACGT TCCCTTTACC
ATGGCGGATG CAACGACCCT GACCGAGGCC GGTTATGTCG GCGAGGATGT CGAGAACATC
ATCCTGAAGC TGTTGCAGTC CGCGGACTAC AATGTCGAGC GTGCTCAGCG CGGCATCGTC
TACATCGACG AGATCGACAA GATCTCGCGC AAGTCCGACA ATCCCTCGAT CACGCGCGAC
GTATCGGGTG AGGGCGTGCA GCAGGCCTTG TTGAAGATCA TGGAAGGCAC GGTCGCGTCC
GTTCCGCCGC AGGGCGGCCG GAAGCATCCG CAGCAGGAGT TCCTGCAGGT CGATACGACG
AATATCCTGT TCATCTGCGG CGGCGCGTTC TCCGGCCTGG AGAAGATCAT CTCCGCGCGA
GGACGCACCA CGTCGATCGG TTTCGCGGCG CAGGTGCTTG CGCCGGAAGA CCGCCGCACC
GGCGAAATCT TCAGGCATGT CGAGCCGGAG GATCTGCTCA AGTACGGCCT GATTCCGGAA
TTCGTCGGGC GTCTGCCTGT CGTGGCCACG CTGGAGGATC TCGACGAGGC GTCGCTGAAA
AAGATCCTGA CCGATCCCAA GAATGCGCTG GTGAAACAAT ATCAGCGGCT GTTCGAGATG
GAGAACATCG AACTGACGTT CGCCGACGAG GCGCTGGGCG CGGTGGCGCG CAAGGCGATC
GAGCGCAAGA CCGGCGCGCG GGGCCTGCGT TCGATTCTCG AAAGCATCCT GCTGGAGACC
ATGTTCGATC TTCCGGGCCT GGAAGGGGTC GAGGAGGTCG TGATCTCGCG CGAAGTGGTC
GAAGGAACCG CGCGGCCGCT GTACATTTAC GCGGACCGCG CCGATCGCGC GAGCGAAACC
AGCGCCAGCG CCTGA
|
|---|
| Protein sequence | MSKVGTGDSK NTLYCSFCGK SQHEVRKLIA GPTVFICDEC VELCMDIIRE ENKSSLVKSR
DGIPTPKEIC KVLDDYVIGQ GHAKKVLSVA VHNHYKRLNH QTKHNDVELA KSNILLIGPT
GSGKTLLAQT LARILDVPFT MADATTLTEA GYVGEDVENI ILKLLQSADY NVERAQRGIV
YIDEIDKISR KSDNPSITRD VSGEGVQQAL LKIMEGTVAS VPPQGGRKHP QQEFLQVDTT
NILFICGGAF SGLEKIISAR GRTTSIGFAA QVLAPEDRRT GEIFRHVEPE DLLKYGLIPE
FVGRLPVVAT LEDLDEASLK KILTDPKNAL VKQYQRLFEM ENIELTFADE ALGAVARKAI
ERKTGARGLR SILESILLET MFDLPGLEGV EEVVISREVV EGTARPLYIY ADRADRASET
SASA
|
|---|
| |