Gene Nwi_1887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1887 
Symbol 
ID3675343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2070593 
End bp2071216 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content62% 
IMG OID637713448 
ProductNADH dehydrogenase subunit B 
Protein accessionYP_318499 
Protein GI75676078 
COG category[C] Energy production and conversion 
COG ID[COG0377] NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases 
TIGRFAM ID[TIGR01957] NADH-quinone oxidoreductase, B subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.884086 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAA GGCGCTCTCG AATGGGATTG AACTCTCCCA CGTCAAAGGT CGCTTACGCC 
GGCGGCACCG TCACGGGCGC GGCGGGAACC TCGATTCTGG ATCCCGCCAC CGGCCGGCCG
GTCGGCGCTA GCGATCCGTA CTTTCTCGAG GTCAATCACG AACTGTCCGA CAAGGGTTTC
TTCGTCGCCG CCGCCGACGA TCTCATCACC TGGGCGCGCA CCGGTTCGCT GATGTGGATG
ACCTTCGGCC TCGCCTGCTG CGCGGTCGAG ATGATGCAGG TTTCGATGCC GCGTTATGAC
GTCGAGCGTT TTGGCTTTGC GCCGCGGGCA TCGCCGCGCC AGTCGGATGT GATGATCGTC
GCCGGAACGC TGACCAACAA GATGGCCCCC GCGCTGCGCA AGGTCTACGA CCAGATGCCG
GAACCGCGTT ACGTGATCTC GATGGGATCG TGCGCCAACG GCGGCGGCTA CTATCATTAC
TCATATTCGG TTGTACGAGG TTGCGATCGA ATCGTGCCGG TCGATATCTA CGTGCCGGGC
TGTCCGCCGA CGGCGGAAGC GCTGCTCTAC GGAATTCTGC TTCTGCAGAA GAAGATCCGG
CGAGTTGGGA CCATCGAACG CTGA
 
Protein sequence
MEERRSRMGL NSPTSKVAYA GGTVTGAAGT SILDPATGRP VGASDPYFLE VNHELSDKGF 
FVAAADDLIT WARTGSLMWM TFGLACCAVE MMQVSMPRYD VERFGFAPRA SPRQSDVMIV
AGTLTNKMAP ALRKVYDQMP EPRYVISMGS CANGGGYYHY SYSVVRGCDR IVPVDIYVPG
CPPTAEALLY GILLLQKKIR RVGTIER