Gene Nwi_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1886 
Symbol 
ID3675342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2069961 
End bp2070581 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID637713447 
ProductNADH dehydrogenase subunit C 
Protein accessionYP_318498 
Protein GI75676077 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.585114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGAGA GCAGGCTCGA TGCCTTGGGC CAGATGATCG TCGCCACGCT TCCGGGCGCG 
GCCACGGGGC ATTCGGTGTC GTTCGGTCAA CTGACCGTGA CGGTCGAGGC CGCGAAGATT
GTCGAGGTCG CCCGCTTCCT CCGCGACGAC CGGCGCTGCC GCTTCGTCAA CTTCATCGAC
GCGACCGCGG TCGATTATCC CGGCCGCGAG AAGCGTTTCG ATGTGGTGTA TCATTTTCTG
TCGCCGACGC TGAACGCGCG CATCCGCCTG CGTGCTCACG CGTCGGAGAC CACGCAGGTG
CCATCGTTGA TCGACGTGTT TCCCGGCGCG GACTGGTTCG AACGGGAGGC CTATGACCTC
TATGGCGTGA TCTTCACCGG GCACCCCGAC ATGCGGCGTT TGTTGACCGA CTATGGATTC
GACGGGCATC CGCTGCGGAA GGATTTTCCG CTCACGGGTT TCGTCGAGGT GCGTTACGAC
GACGCCGAGA AGCGGGTGGT GTACGAACCG GTGCGTCTCA ACCAGGAATT TCGCAAGTTC
GACTTCATGT CACCGTGGGA GGGCGCCGAT TATCCGCTGC CGGGTGACGA GAAGGCGACC
GGCGGCAAGG CGGGTAGCTG A
 
Protein sequence
MDESRLDALG QMIVATLPGA ATGHSVSFGQ LTVTVEAAKI VEVARFLRDD RRCRFVNFID 
ATAVDYPGRE KRFDVVYHFL SPTLNARIRL RAHASETTQV PSLIDVFPGA DWFEREAYDL
YGVIFTGHPD MRRLLTDYGF DGHPLRKDFP LTGFVEVRYD DAEKRVVYEP VRLNQEFRKF
DFMSPWEGAD YPLPGDEKAT GGKAGS