Gene Nwi_1883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1883 
Symbol 
ID3675339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2067024 
End bp2067776 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content64% 
IMG OID637713444 
ProductNADH dehydrogenase subunit E 
Protein accessionYP_318495 
Protein GI75676074 
COG category[C] Energy production and conversion 
COG ID[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit 
TIGRFAM ID[TIGR01958] NADH-quinone oxidoreductase, E subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.378018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGTTC GCCGCCTGGC ACCGAAAGAA CAGCAGCCCG AGAGTTTCGC GTTCAGCGAG 
GAGAACCTCG CTTGGGCCAA GAAGCAGATC GCGCAATATC CAGCAGGCCG GCAAGCGTCG
GCCGCGATCG CAATCTTGTG GCGCGCGCAG GAACAGAACG GCGGCTGGAT CTCCGAGGCC
GCGATCCGCA CCGTGGCCGA CATGCTCGAC ATGCCCTACA TCAGGATGCT GGAGATCGCG
ACCTTCTACA CCATGTTCCA GCTTCAGCCG GTCGGCAGGA AGGCGCACAT CCAGGTCTGC
GGCACCACGC CTTGCCGGCT GCGGGGCGCG GAGGACATTC TCGCCGTCTG CAAGAGCCGT
ATTCATCATG AGCCGTTTCA TCTCTCAAAA GACGGCGACT TCTCGTGGGA GGAAGTCGAG
TGCCTCGGCT CCTGCGTCAA CGCGCCGATG GTGCTGATCT GGAAAGACAC CTATGAGGAC
TTGACGAAGG AGAACTTCGG CAAGGTGCTT GACGGGTTTG CCTCGGGCCA GCCGCCGAAG
CCCGGTCCCC AGATCGACCG CCAGTTTTCC GCGCCGGTCG GCGGCCCGAC CACATTGAAT
ACGGCGGCGA AAGGCGACGG GGGACGGCGT TCCGCCGCTC AGCCGGCCTT GACGGATGCG
GACGCCAAGA AACCGACCGA TACCGCAAGC CGGCGGGAAA GCCCCATGCC GAAGCCGCCC
GCCGATGACG CGACCAGGAA GGGCAAGACC TGA
 
Protein sequence
MSVRRLAPKE QQPESFAFSE ENLAWAKKQI AQYPAGRQAS AAIAILWRAQ EQNGGWISEA 
AIRTVADMLD MPYIRMLEIA TFYTMFQLQP VGRKAHIQVC GTTPCRLRGA EDILAVCKSR
IHHEPFHLSK DGDFSWEEVE CLGSCVNAPM VLIWKDTYED LTKENFGKVL DGFASGQPPK
PGPQIDRQFS APVGGPTTLN TAAKGDGGRR SAAQPALTDA DAKKPTDTAS RRESPMPKPP
ADDATRKGKT