Gene Nwi_1880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1880 
Symbol 
ID3675336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2062543 
End bp2063613 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content61% 
IMG OID637713441 
ProductNADH dehydrogenase subunit H 
Protein accessionYP_318492 
Protein GI75676071 
COG category[C] Energy production and conversion 
COG ID[COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.517536 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.265736 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATT TCTTCGCAAT GCCGTTGTGG ACGGACTTTC TATGGCCTCT GATCGTGATG 
GTGGCGCAGA GCGTGCTGCT GCTCGTCGTT CTGCTGATCG CGATCGCCTA CATCCTCCTC
GCCGACCGGA AAATCTGGGC CGCGGTGCAG ATCCGGCGCG GTCCAAACGT GGTCGGACCG
TGGGGGCTGT TTCAGTCGTT CGCCGATCTT CTGAAGTTCG TGCTGAAGGA GCCGATCATC
CCCTCCGGCG CCAACAAGGG CGTGTTCCTT CTGGCGCCGC TGGTCTCCTG CGTGCTGGCG
CTGGCGGCGT GGGCGGTGAT CCCCGTCAAT CTGAACTGGG TCATTGCCGA CATCAATGTC
GGGATTCTCT ACATCTTCGC GATCTCGTCG CTGTCGATCT ACGGCATCAT CATGGGCGGC
TGGGCGTCCA ACTCGAAGTA TCCTTTTCTT GCTGCCTTGC GTTCGGCGGC GCAGATGGTC
TCCTACGAGG TGTCGATCGG TTTCGTCATC ATCACGGTAT TGCTCTGCGC AGGTTCACTG
AACCTCTCCG CCATCGTCGA GGCGCAGCAT ACCAGCGGGC TGGCCACCCT GATCGGCCTG
CCGTGGCTGA CCTTCCTGAA CTGGTACTGG CTGCCGCTTC TGCCGATGTT CGTGGTGTTT
TACGTTTCGG CCCTGGCTGA GACCAATCGC CCGCCGTTCG ACCTCGTCGA GGCGGAATCC
GAACTCGTCG CGGGCTTCAT GGTCGAGTAC GGGTCGACGC CGTACCTGTT GTTCATGCTC
GGCGAGTATG TCGCGATCAC CACCATGTGC GCGATGGGCG CGATCCTTTT CATGGGCGGC
TGGCTGCCGC CGGTGGACCT GCCGCCGTTC AACTGGGTGC CCGGCGTCAT CTGGTTCTCG
CTGAAACTGT TCTTCATGTT CTTCCTGATC GCGATGGCGA AGGCGATCGT CCCGCGCTAC
CGCTATGATC AACTGATGCG GCTCGGCTGG AAGGTGTTCC TGCCGCTGTC GCTGGCGATG
GTGGTGATCG TGGCGGCCGT ATTGCAGTTC GCCGGCATCG CGCCGAAGTG A
 
Protein sequence
MADFFAMPLW TDFLWPLIVM VAQSVLLLVV LLIAIAYILL ADRKIWAAVQ IRRGPNVVGP 
WGLFQSFADL LKFVLKEPII PSGANKGVFL LAPLVSCVLA LAAWAVIPVN LNWVIADINV
GILYIFAISS LSIYGIIMGG WASNSKYPFL AALRSAAQMV SYEVSIGFVI ITVLLCAGSL
NLSAIVEAQH TSGLATLIGL PWLTFLNWYW LPLLPMFVVF YVSALAETNR PPFDLVEAES
ELVAGFMVEY GSTPYLLFML GEYVAITTMC AMGAILFMGG WLPPVDLPPF NWVPGVIWFS
LKLFFMFFLI AMAKAIVPRY RYDQLMRLGW KVFLPLSLAM VVIVAAVLQF AGIAPK