Gene Nwi_1875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1875 
Symbol 
ID3675331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2057425 
End bp2058933 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content60% 
IMG OID637713436 
ProductNADH dehydrogenase subunit M 
Protein accessionYP_318487 
Protein GI75676066 
COG category[C] Energy production and conversion 
COG ID[COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) 
TIGRFAM ID[TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.123353 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.162516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT GGCCCATTCT GTCCGTCACG ACCTTTCTGC CGGCGGTCGG CGCGATCCTG 
ATTTACGTCA TGGCTCGTGG CAGCGACGAA GCCGCCAACC GAACCGCGCG CTGGATCGCG
CTGTGGACCA CGATCGTCAC CTTCGCGGTG TCGCTGCTCC TGGTGACGCG CTTCGATCCG
ACCAATACGG GATTCCAGTT CGTCGAGCAG GCGACATGGC TCGCCACCGG CATTCGGTAT
CACATGGGAG TGGACGGTAT TTCGCTGCCG TTCGTCATTC TCACCACGGC GTTGATGCCG
CTGTGCATCA TCGCGAGCTG GAAATCGATT ACCCGTCGCG TGCCGGCTTA CATGATGGCG
TTTCTAGTTC TGGAAACGCT GATGATCGGC ACGTTCTCGG CGCTCGATCT GCTGCTGTTC
TACGTGTTCT TTGAAGGCGG TCTGATCCCG ATGTTCCTGA TCATCGGGAT CTGGGGCGGT
CCGCGCCGCG TCTATGCGAC CTTCAAGTTC TTCCTCTATA CGCTGCTCGG CTCGGTGCTG
ATGCTGCTTG CCATCATGGC GCTCTACTGG AATGCCGGGA CCACCGACAT CCCGACGCTG
ATGCAGACCT CCGTCCCGTA CAATTTGCAG AAGTGGGCGT GGCTGGCCTT CTTTGCATCG
TTCGCGGTCA AGATGCCGAT GTGGCCGGTG CATACCTGGC TTCCGGATGC GCATGTGGAG
GCGCCCACGG CGGGATCGGT GATCCTCGCT GCGATTATGC TGAAGATGGG AGGCTACGGC
TTCCTGCGGT TCTCGCTGCC GATGTTTCCG CTTGCGTCGC ATGACTTTGC GCCGCTGGTC
TTCGTGCTCT CCGCCGTCGC GATCGTTTAT ACCTCGCTGG TCGCGCTGAT GCAGGAGGAC
ATGAAGAAGC TGATCGCCTA TTCGTCGGTG GCGCACATGG GCTTCGTGAC CATGGGAATC
TTTGCCGGCA CCATGCAAGG CATTCACGGC GGTGTGTTCC AGATGGTTTC GCACGGCATC
GTCTCGGGCG CGCTTTTTCT GTGTGTCGGC GTCGTTTACG ACCGAATGCA CACGCGCGAA
ATCGCGGCCT ATGGCGGGCT TGTCAATCGG ATGCCGCTTT ATGCGCTGGT GTTCCTCATT
TTTACGATGG CTAATGTCGG GCTGCCCGGA ACGTCCGGAT TTGTCGGCGA GTTCCTGGCG
CTGATCGGAA CCTTCAAGGT CAGCATTCCC ACGGCGGTGG CGGCGACGCT CGGCGTGATC
CTGTCAGCGG CATACGCCCT GTGGCTCTAT CGCAAGATCG TGTTCGGTGC GCTGGTCAAA
CCGTCGCTTG CGAGCATCAA GGATCTGACT TTCCGTGAGG GCTTGACGCT TGCGCCGCTT
GTGGTGCTGA CGATCCTGTT CGGCGTTTAT CCGAAGCCGG TGCTCGATTT CTCGGCAGCT
TCCGTACAAA ATCTCGTCAA CAATTATGCA AGCGCGACCG CCGCCATCAA GGCCGCGGCG
CTGCAGTGA
 
Protein sequence
MTTWPILSVT TFLPAVGAIL IYVMARGSDE AANRTARWIA LWTTIVTFAV SLLLVTRFDP 
TNTGFQFVEQ ATWLATGIRY HMGVDGISLP FVILTTALMP LCIIASWKSI TRRVPAYMMA
FLVLETLMIG TFSALDLLLF YVFFEGGLIP MFLIIGIWGG PRRVYATFKF FLYTLLGSVL
MLLAIMALYW NAGTTDIPTL MQTSVPYNLQ KWAWLAFFAS FAVKMPMWPV HTWLPDAHVE
APTAGSVILA AIMLKMGGYG FLRFSLPMFP LASHDFAPLV FVLSAVAIVY TSLVALMQED
MKKLIAYSSV AHMGFVTMGI FAGTMQGIHG GVFQMVSHGI VSGALFLCVG VVYDRMHTRE
IAAYGGLVNR MPLYALVFLI FTMANVGLPG TSGFVGEFLA LIGTFKVSIP TAVAATLGVI
LSAAYALWLY RKIVFGALVK PSLASIKDLT FREGLTLAPL VVLTILFGVY PKPVLDFSAA
SVQNLVNNYA SATAAIKAAA LQ