| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nwi_1864 |
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| Symbol | |
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| ID | 3674513 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter winogradskyi Nb-255 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007406 |
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| Strand | - |
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| Start bp | 2045570 |
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| End bp | 2046850 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637713425 |
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| Product | LolC/E family lipoprotein releasing system, transmembrane protein |
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| Protein accession | YP_318476 |
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| Protein GI | 75676055 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.172929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0361846 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGAGA CCATGAACGA GCCGCTCCGG ACCAAGCCTT TCGCTGCCTT CGAGTGGATG
CTGTCCGGAC GCTATCTGCG AGCACGGCGG AAGGAAGGGT TCATCTCCGT CATTGCCGGA
TTCTCGTTCC TCGGCATCAT GCTCGGCGTG GCCACGCTGA TCATCGTGAT GGCCGTCATG
AATGGGTTTC GTACCGAACT GCTCAGCAAG ATCCTTGGCC TGAACGGGCA TCTCCTGGTT
CAGCCGCTGG AGTCGCCGCT CACCGACTGG AAGGAGGTCG CGGAACGCGT CAGCCAGGTG
AAGGGGATAC GGCTTGCCGC GCCTGTCGTC GACGGTCAGG CGCTCGGCTC TTCGCCCTAT
AATGCCGCTG GTGTTTTTGT CCGGGGCATC AGGGCCGATG ACCTCAACAA TCTCACCTCC
ATCGCCAGGA ACATCAAACA GGGGACGCTC GACGGCTTCG ACGAGGGGCA GGGCGTGGCC
ATCGGCCGGC GCCTGGCCGA TCAACTCTCG CTGCACGCGG GCGACAGCGT GACGCTGGTC
GCGCCGCGCG GGGCCGTGAC TCCGATGGGC ACGACTCCAC GCATCAAGCC GTACAAGATC
GCGGCGGTGT TCGAGATCGG GATGTCCGAA TACGACTCCA CCTTCGTATT CATGCCGCTG
GCCGAGGCGC AGGCCTATTT CAATCGCGCC AACGATGTCA CCTCGATCGA GGTCTACACG
GACAATCCTG ACAAGATCGA TGACTTCCGC AAATCGGTGA CGGAGGCCGC CGGCCGGCCA
GTGTTTCTGG TTGACTGGCG GCAGCGCAAT TCCACGTTCT TCAATGCGCT CCAGGTTGAA
CGCAATGTGA TGTTCCTGAT CCTGACGCTG ATCGTCCTCG TCGCGGCGCT GAATATCGTG
TCGGGGCTGA TCATGCTGGT CAAGGACAAG GGGAGCGATA TCGCCATCCT GCGGACCATG
GGAGCTTCGC AGGGGGCGAT CATGCGTATC TTCCTGATCA CGGGGGCCGC GATCGGCGTT
GTCGGCACGC TCACCGGCTT TGTCGTGGGG CTCGTGGTCT GCCTCAATAT CGAGTCGATC
CGGGCGTTCC TCTCGTGGCT CACCAGCACC GAACTGTTCT CGCCGGAGCT TTATTTCCTG
TCCAAGCTGC CCGCCGAGAT CGATGCGCGG GAGACAAGCG CCGTCGTGAT CATGGCGCTG
ACGCTGTCGT TCCTCGCTAC TCTTTATCCG TCATGGCGCG CGGCCCGCCT CGATCCCGTC
GAAGCCTTGC GGTACGAGTG A
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| Protein sequence | MDETMNEPLR TKPFAAFEWM LSGRYLRARR KEGFISVIAG FSFLGIMLGV ATLIIVMAVM
NGFRTELLSK ILGLNGHLLV QPLESPLTDW KEVAERVSQV KGIRLAAPVV DGQALGSSPY
NAAGVFVRGI RADDLNNLTS IARNIKQGTL DGFDEGQGVA IGRRLADQLS LHAGDSVTLV
APRGAVTPMG TTPRIKPYKI AAVFEIGMSE YDSTFVFMPL AEAQAYFNRA NDVTSIEVYT
DNPDKIDDFR KSVTEAAGRP VFLVDWRQRN STFFNALQVE RNVMFLILTL IVLVAALNIV
SGLIMLVKDK GSDIAILRTM GASQGAIMRI FLITGAAIGV VGTLTGFVVG LVVCLNIESI
RAFLSWLTST ELFSPELYFL SKLPAEIDAR ETSAVVIMAL TLSFLATLYP SWRAARLDPV
EALRYE
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