Gene Nwi_1842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNwi_1842 
Symbol 
ID3674767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter winogradskyi Nb-255 
KingdomBacteria 
Replicon accessionNC_007406 
Strand
Start bp2016794 
End bp2019130 
Gene Length2337 bp 
Protein Length778 aa 
Translation table11 
GC content66% 
IMG OID637713403 
ProductComEC/Rec2-related protein 
Protein accessionYP_318454 
Protein GI75676033 
COG category[R] General function prediction only 
COG ID[COG0658] Predicted membrane metal-binding protein 
TIGRFAM ID[TIGR00360] ComEC/Rec2-related protein 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.818822 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.518814 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGC GGGGCAGGGC TCGCGATCGG AGGGGAGGGT ACGCCGGAAC CTGGCCGACG 
CGGCAAGCCG TCGCCGCGCC TTCGCAAACC CCTTCGGAAG CCTTGCCGGC AATCGTCGCG
CGGCTGCGGG CCTGGGCGAA CGCCGAAGCG GCAGCCGTTC GCCTCCTGCC ATGGGTCCCG
GTGGCGTTCG GCGCGGGCAT TGCGATCTAT TTTGCCGCCG ATCATGAGCC CGTTGCCTGG
GTTGTCTCCG TGACCGCCGG AGCGTTGTTC GTGTCGGCGC TGCTCCTGCG CCGGCATCGG
ATATTTCCCG CCGCCGTGAT GGTTGCGGCG GTCGCCGCAG GGTTCGCTGT CGCCACGATC
AAGACGGCGC ATGTCTCGCA CGCTGTGCTG ACGCGGCCGA TGTACACGCC GCTGCTTCAG
GGTTTCGTCG AAACCAGGGA AGTGCGCGAG CGGACTGATC GATTTATCCT GCGCGTCGTT
CGGATGGACA GTCGGCGGCC GCACGTCAAG CTCGATCGCG TCCGGCTGTC CGTCAGGAAG
GGCGCCGCGC CCGCTGTCGG CAGTTTCGTC GAGTTGAAAG CGCGGTTGCA GCCGCCGCTT
ACGCCTGTGC GGCCCGGAAG CTACGACTTC GCCCGCGATA TGTACTTCCA GGGTATCGGC
GCTTCCGGCT TCGTCATGGG CGCCATCAAA ACCGTCGCTT CTCCGCCTGC CGGCGGGATT
GCTTTGCGCT ATGCCGCGCT GATGCAGGAG TTGCGCGACG CCATCGACGC CCGCATCCGG
CTTGTTCTCA GCGGCGATTC GCGGGCCATC GCTACCGCGC TGCTGACGGG ACGGCGCGAC
GCCATCACAC CGCCCGTGAA TGAGGCGATG TTCATTTCGG GGCTGGGCCA TGTGCTTTCG
ATCTCCGGCT ATCACATGGC CGTCGTCGCC GGCGTGGTGT TCTTCGCGGT GCGGGCGCTG
CTGGCGCTGG TCCCGGCGCT GACGGCGACC TTCCCGATCA AGAAGTGGTC CGCGGCGGCG
GCGCTCGCGG CCGCCGCTTT CTATCTTCTG CTGTCGGGCG CGGAAGTCGC GACCCAGCGC
TCGTTCTTCA TGACGGCGGC GGTGCTGATC GCGATCATGG TGGACAGGCG CGCCATTACG
TTTCGCACGC TCGCGGTGGC GGCGATGATC GTGCTTGCGA TCGCGCCGGA GTCATTGATC
CATCCGAGCT TTCAGATGTC GTTCGCGGCG ACGCTCGGAC TGGTGGCGCT GGTCCAGGTG
GGCATGCCGA GGATGCTCGC AACGCCAGAT CACTCGCCGA CGGCGAAGGC CGCCCTGTGG
GGTGGACGCG AAATCGCCAT GCTGGCGCTG GCCTCATTCG TGGCCGGACT TGCGACCACG
CCCTATGCCG CGTTTCATTT CCATCGCGTG ACGCCATACG GCATGGCTGC GAACCTGCTG
GCGATGCCCG TGATATCGGC GCTGGTGATG CCGGCGGGAT TGCTCGGCCT CGCGGCGATG
CCGTTCGGCT TCGATGGCGT GTTCTGGCGG CTGATGGACT TCGGCATTGA ATGGATGGTT
GCCGTGGCTC AAGGGGTCGT CGAACTGCCG GGCTCCATCG GCCGCATCGC TGCATTCGGA
ACGGGGCCGC TGCTCGCGGC CACAGCGGGC ATCGTCCTGC TCGGACTCCT GAGAACGCCG
CTGCGCTGGG GCGGCGCGAT CGTTGTGGGG CTGGCGATCG TGTGGTCACT AGCGGTGAAG
CCGCCGGATA TCCTGATATC CGCTGAAGGT CGCAACGTCG CCGTGAGGGG CGGGGACGGC
CGGCTGCGTC TCATCAGCAC GGGCAAGGAT TCTTTTACGG TCAGGGAATG GCTTGCCGCC
GATGGGGACG TGCGTGGGCC CACGGATCCC ACGCTGGCGG AGGGCGTCTC GTGCGACGAT
GCGGGCTGCG TGGTCAAGGC GAGTGGAGGT GGGATCGTCG CTCTCACGCG GCATCCGGAG
GCGCTGCAGG ATGATTGCGC GCGTGCGGAG CTTATAGTGA CGCGGTGGCA GGCTCCGGAA
GGCTGCCTCG CGCATGTGAT CGATCAAAAC CGGCTGCGGC GTGAAGGCGC TCTTGCCTTA
TGGCGGACCC CGAATTCTTC CAGACAAGAT GCTTCGAGAC TCGATGTTTC AAGATCCGGC
GCTTCAAAGC CCGGCGCTTC AAGACCCGGC TTCGCTGTCG ATGCCGTCCG TCCTGCTGGC
CTCAAGCGTC CCTGGTCATC CGCCGCCTTC GATGAACAGC CGGCACGACC GGGATCGAAG
CCGGAGCCTT CGGTCGACGC CACGCCTGAT CCCGAGGATC TCCAGCCGGA CGATTGA
 
Protein sequence
MAERGRARDR RGGYAGTWPT RQAVAAPSQT PSEALPAIVA RLRAWANAEA AAVRLLPWVP 
VAFGAGIAIY FAADHEPVAW VVSVTAGALF VSALLLRRHR IFPAAVMVAA VAAGFAVATI
KTAHVSHAVL TRPMYTPLLQ GFVETREVRE RTDRFILRVV RMDSRRPHVK LDRVRLSVRK
GAAPAVGSFV ELKARLQPPL TPVRPGSYDF ARDMYFQGIG ASGFVMGAIK TVASPPAGGI
ALRYAALMQE LRDAIDARIR LVLSGDSRAI ATALLTGRRD AITPPVNEAM FISGLGHVLS
ISGYHMAVVA GVVFFAVRAL LALVPALTAT FPIKKWSAAA ALAAAAFYLL LSGAEVATQR
SFFMTAAVLI AIMVDRRAIT FRTLAVAAMI VLAIAPESLI HPSFQMSFAA TLGLVALVQV
GMPRMLATPD HSPTAKAALW GGREIAMLAL ASFVAGLATT PYAAFHFHRV TPYGMAANLL
AMPVISALVM PAGLLGLAAM PFGFDGVFWR LMDFGIEWMV AVAQGVVELP GSIGRIAAFG
TGPLLAATAG IVLLGLLRTP LRWGGAIVVG LAIVWSLAVK PPDILISAEG RNVAVRGGDG
RLRLISTGKD SFTVREWLAA DGDVRGPTDP TLAEGVSCDD AGCVVKASGG GIVALTRHPE
ALQDDCARAE LIVTRWQAPE GCLAHVIDQN RLRREGALAL WRTPNSSRQD ASRLDVSRSG
ASKPGASRPG FAVDAVRPAG LKRPWSSAAF DEQPARPGSK PEPSVDATPD PEDLQPDD